Analysis of interatomic Contacts of Structural Units in PDB entry:
6R7X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6R7X entry

There are 2 chains in PDB entry 6R7X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 13LYS 641
B
SER 13LYS 641
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 6R7X. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
28 41Right-handed alpha
Helix 2
AA2
A
62 67Right-handed 310
Helix 3
AA3
A
75 87Right-handed alpha
Helix 4
AA4
A
104 108Right-handed 310
Helix 5
AA5
A
120 134Right-handed alpha
Helix 6
AA6
A
157 164Right-handed alpha
Helix 7
AA7
A
179 184Right-handed alpha
Helix 8
AA8
A
196 220Right-handed alpha
Helix 9
AA9
A
222 235Right-handed alpha
Helix 10
AB1
A
237 242Right-handed alpha
Helix 11
AB2
A
244 273Right-handed alpha
Helix 12
AB3
A
306 316Right-handed alpha
Helix 13
AB4
A
317 350Right-handed alpha
Helix 14
AB5
A
360 386Right-handed alpha
Helix 15
AB6
A
392 422Right-handed alpha
Helix 16
AB7
A
425 449Right-handed alpha
Helix 17
AB8
A
449 469Right-handed alpha
Helix 18
AB9
A
475 487Right-handed alpha
Helix 19
AC1
A
495 510Right-handed alpha
Helix 20
AC2
A
516 539Right-handed alpha
Helix 21
AC3
A
554 575Right-handed alpha
Helix 22
AC4
A
587 613Right-handed alpha
Helix 23
AC5
A
617 641Right-handed alpha
Helix 24
AC6
B
28 41Right-handed alpha
Helix 25
AC7
B
62 67Right-handed 310
Helix 26
AC8
B
75 87Right-handed alpha
Helix 27
AC9
B
104 108Right-handed 310
Helix 28
AD1
B
120 134Right-handed alpha
Helix 29
AD2
B
157 164Right-handed alpha
Helix 30
AD3
B
179 184Right-handed alpha
Helix 31
AD4
B
196 220Right-handed alpha
Helix 32
AD5
B
222 235Right-handed alpha
Helix 33
AD6
B
237 242Right-handed alpha
Helix 34
AD7
B
244 273Right-handed alpha
Helix 35
AD8
B
306 316Right-handed alpha
Helix 36
AD9
B
317 350Right-handed alpha
Helix 37
AE1
B
360 386Right-handed alpha
Helix 38
AE2
B
392 422Right-handed alpha
Helix 39
AE3
B
425 449Right-handed alpha
Helix 40
AE4
B
449 469Right-handed alpha
Helix 41
AE5
B
475 487Right-handed alpha
Helix 42
AE6
B
495 510Right-handed alpha
Helix 43
AE7
B
516 539Right-handed alpha
Helix 44
AE8
B
554 575Right-handed alpha
Helix 45
AE9
B
587 613Right-handed alpha
Helix 46
AF1
B
617 641Right-handed alpha
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There are 8 sheets in PDB entry 6R7X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
51 54first strand
Strand 2
A
69 73anti-parallel
Strand 3
A
19 23anti-parallel
Strand 4
A
167 172anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
89 91first strand
Strand 2
A
97 99anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
136 137first strand
Strand 2
A
155 156anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
291 294first strand
Strand 2
A
301 304anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
51 54first strand
Strand 2
B
69 73anti-parallel
Strand 3
B
19 23anti-parallel
Strand 4
B
167 172anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
89 91first strand
Strand 2
B
97 99anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
136 137first strand
Strand 2
B
155 156anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
291 294first strand
Strand 2
B
301 304anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il