Analysis of interatomic Contacts of Structural Units in PDB entry:
6RI7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6RI7 entry

There are 10 chains in PDB entry 6RI7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
N
A 5 A 36
T
T 4 T 35
F
MET 1VAL 156
A
GLU 7LEU 234
B
SER 4VAL 232
C
VAL 2GLU 1342
D
GLU 16ARG 1373
E
ALA 2GLU 74
R
G 5 G 14
G
MET 1VAL 156
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are116 helices in PDB entry 6RI7. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
F
7 24Right-handed alpha
Helix 2
AA2
F
24 37Right-handed alpha
Helix 3
AA3
F
45 72Right-handed alpha
Helix 4
AA4
F
122 129Right-handed alpha
Helix 5
AA5
A
34 50Right-handed alpha
Helix 6
AA6
A
77 88Right-handed alpha
Helix 7
AA7
A
113 115Right-handed 310
Helix 8
AA8
A
154 162Right-handed alpha
Helix 9
AA9
A
212 230Right-handed alpha
Helix 10
AB1
B
34 50Right-handed alpha
Helix 11
AB2
B
77 88Right-handed alpha
Helix 12
AB3
B
113 115Right-handed 310
Helix 13
AB4
B
154 162Right-handed alpha
Helix 14
AB5
B
212 230Right-handed alpha
Helix 15
AB6
C
4 9Right-handed alpha
Helix 16
AB7
C
28 39Right-handed alpha
Helix 17
AB8
C
48 57Right-handed alpha
Helix 18
AB9
C
81 89Right-handed alpha
Helix 19
AC1
C
206 213Right-handed alpha
Helix 20
AC2
C
216 225Right-handed alpha
Helix 21
AC3
C
242 246Right-handed 310
Helix 22
AC4
C
270 281Right-handed alpha
Helix 23
AC5
C
288 295Right-handed 310
Helix 24
AC6
C
318 329Right-handed alpha
Helix 25
AC7
C
345 354Right-handed alpha
Helix 26
AC8
C
358 371Right-handed alpha
Helix 27
AC9
C
377 390Right-handed alpha
Helix 28
AD1
C
398 409Right-handed alpha
Helix 29
AD2
C
421 437Right-handed alpha
Helix 30
AD3
C
455 481Right-handed alpha
Helix 31
AD4
C
488 493Right-handed 310
Helix 32
AD5
C
494 508Right-handed alpha
Helix 33
AD6
C
519 527Right-handed alpha
Helix 34
AD7
C
607 613Right-handed alpha
Helix 35
AD8
C
648 650Right-handed 310
Helix 36
AD9
C
656 661Right-handed 310
Helix 37
AE1
C
662 667Right-handed alpha
Helix 38
AE2
C
670 674Right-handed 310
Helix 39
AE3
C
675 688Right-handed alpha
Helix 40
AE4
C
704 712Right-handed alpha
Helix 41
AE5
C
819 826Right-handed alpha
Helix 42
AE6
C
858 865Right-handed alpha
Helix 43
AE7
C
942 979Right-handed alpha
Helix 44
AE8
C
986 991Right-handed alpha
Helix 45
AE9
C
1006 1038Right-handed alpha
Helix 46
AF1
C
1081 1084Right-handed 310
Helix 47
AF2
C
1099 1103Right-handed 310
Helix 48
AF3
C
1109 1134Right-handed alpha
Helix 49
AF4
C
1137 1151Right-handed alpha
Helix 50
AF5
C
1165 1177Right-handed alpha
Helix 51
AF6
C
1191 1202Right-handed alpha
Helix 52
AF7
C
1238 1243Right-handed alpha
Helix 53
AF8
C
1271 1281Right-handed alpha
Helix 54
AF9
C
1284 1293Right-handed alpha
Helix 55
AG1
C
1297 1310Right-handed alpha
Helix 56
AG2
C
1320 1333Right-handed alpha
Helix 57
AG3
D
26 34Right-handed alpha
Helix 58
AG4
D
77 81Right-handed 310
Helix 59
AG5
D
96 101Right-handed alpha
Helix 60
AG6
D
113 118Right-handed alpha
Helix 61
AG7
D
122 129Right-handed alpha
Helix 62
AG8
D
131 140Right-handed alpha
Helix 63
AG9
D
161 172Right-handed alpha
Helix 64
AH1
D
181 192Right-handed alpha
Helix 65
AH2
D
195 208Right-handed alpha
Helix 66
AH3
D
210 230Right-handed alpha
Helix 67
AH4
D
233 236Right-handed 310
Helix 68
AH5
D
263 285Right-handed alpha
Helix 69
AH6
D
288 309Right-handed alpha
Helix 70
AH7
D
326 332Right-handed alpha
Helix 71
AH8
D
336 342Right-handed alpha
Helix 72
AH9
D
370 377Right-handed alpha
Helix 73
AI1
D
377 389Right-handed alpha
Helix 74
AI2
D
393 404Right-handed alpha
Helix 75
AI3
D
405 417Right-handed alpha
Helix 76
AI4
D
430 432Right-handed 310
Helix 77
AI5
D
452 457Right-handed alpha
Helix 78
AI6
D
473 484Right-handed alpha
Helix 79
AI7
D
485 489Right-handed 310
Helix 80
AI8
D
503 514Right-handed alpha
Helix 81
AI9
D
529 540Right-handed alpha
Helix 82
AJ1
D
574 581Right-handed alpha
Helix 83
AJ2
D
588 593Right-handed 310
Helix 84
AJ3
D
597 613Right-handed alpha
Helix 85
AJ4
D
614 636Right-handed alpha
Helix 86
AJ5
D
640 644Right-handed 310
Helix 87
AJ6
D
648 670Right-handed alpha
Helix 88
AJ7
D
674 703Right-handed alpha
Helix 89
AJ8
D
720 728Right-handed alpha
Helix 90
AJ9
D
733 742Right-handed alpha
Helix 91
AK1
D
768 805Right-handed alpha
Helix 92
AK2
D
834 840Right-handed alpha
Helix 93
AK3
D
865 876Right-handed alpha
Helix 94
AK4
D
884 888Right-handed 310
Helix 95
AK5
D
914 925Right-handed alpha
Helix 96
AK6
D
926 930Right-handed 310
Helix 97
AK7
D
937 949Right-handed alpha
Helix 98
AK8
D
1136 1147Right-handed alpha
Helix 99
AK9
D
1216 1224Right-handed alpha
Helix 100
AL1
D
1225 1245Right-handed alpha
Helix 101
AL2
D
1249 1261Right-handed alpha
Helix 102
AL3
D
1282 1295Right-handed alpha
Helix 103
AL4
D
1308 1313Right-handed alpha
Helix 104
AL5
D
1319 1324Right-handed alpha
Helix 105
AL6
D
1328 1339Right-handed alpha
Helix 106
AL7
D
1346 1354Right-handed alpha
Helix 107
AL8
D
1360 1373Right-handed alpha
Helix 108
AL9
E
6 13Right-handed alpha
Helix 109
AM1
E
17 33Right-handed alpha
Helix 110
AM2
E
45 56Right-handed alpha
Helix 111
AM3
E
60 74Right-handed alpha
Helix 112
AM4
G
7 24Right-handed alpha
Helix 113
AM5
G
24 38Right-handed alpha
Helix 114
AM6
G
45 71Right-handed alpha
Helix 115
AM7
G
78 82Right-handed 310
Helix 116
AM8
G
122 127Right-handed alpha
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There are 48 sheets in PDB entry 6RI7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
5 6first strand
Strand 2
F
73 74parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
101 104first strand
Strand 2
F
90 94anti-parallel
Strand 3
F
144 154anti-parallel
Strand 4
F
136 141anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
13 17first strand
Strand 2
A
23 31anti-parallel
Strand 3
A
199 207anti-parallel
Strand 4
A
180 189anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
97 104first strand
Strand 2
A
140 148anti-parallel
Strand 3
A
54 61anti-parallel
Strand 4
A
171 172anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
91 92first strand
Strand 2
A
121 122anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
108 111first strand
Strand 2
A
129 133anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
13 18first strand
Strand 2
B
24 29anti-parallel
Strand 3
B
198 207anti-parallel
Strand 4
B
180 190anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
97 104first strand
Strand 2
B
140 149anti-parallel
Strand 3
B
53 61anti-parallel
Strand 4
B
171 172anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
90 92first strand
Strand 2
B
121 123anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
108 111first strand
Strand 2
B
129 133anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
152 153first strand
Strand 2
B
175 176anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
13 14first strand
Strand 2
C
1182 1183parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
59 60first strand
Strand 2
C
66 74anti-parallel
Strand 3
C
93 104anti-parallel
Strand 4
C
115 118anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
59 60first strand
Strand 2
C
66 74anti-parallel
Strand 3
C
93 104anti-parallel
Strand 4
C
122 128anti-parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
143 145first strand
Strand 2
C
512 514anti-parallel
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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
451 453first strand
Strand 2
C
147 151anti-parallel
Strand 3
C
530 531parallel
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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
154 158first strand
Strand 2
C
173 177anti-parallel
Strand 3
C
184 187anti-parallel
Strand 4
C
195 198anti-parallel
Strand 5
C
204 205anti-parallel
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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
227 231first strand
Strand 2
C
332 336anti-parallel
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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
255 257first strand
Strand 2
C
260 263anti-parallel
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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
301 303first strand
Strand 2
C
308 311anti-parallel
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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
580 581first strand
Strand 2
C
587 594anti-parallel
Strand 3
C
599 606anti-parallel
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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
580 581first strand
Strand 2
C
587 594anti-parallel
Strand 3
C
652 653anti-parallel
Strand 4
C
616 617parallel
Strand 5
C
633 637anti-parallel
Strand 6
C
642 646anti-parallel
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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
716 717first strand
Strand 2
C
782 785anti-parallel
Strand 3
C
768 769anti-parallel
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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
748 752first strand
Strand 2
C
731 736anti-parallel
Strand 3
C
722 726anti-parallel
Strand 4
C
776 777anti-parallel
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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
817 818first strand
Strand 2
C
1096 1098anti-parallel
Strand 3
C
798 804parallel
Strand 4
C
1226 1234anti-parallel
Strand 5
C
1065 1067anti-parallel
Strand 6
C
1073 1075anti-parallel
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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
834 838first strand
Strand 2
C
1048 1055anti-parallel
Strand 3
C
927 935anti-parallel
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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
882 884first strand
Strand 2
C
918 919anti-parallel
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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
887 888first strand
Strand 2
C
914 915anti-parallel
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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1086 1087first strand
Strand 2
C
1213 1214anti-parallel
Strand 3
C
1219 1220anti-parallel
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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1244 1246first strand
Strand 2
D
350 356anti-parallel
Strand 3
D
465 469anti-parallel
Strand 4
D
421 425anti-parallel
Strand 5
D
434 437anti-parallel
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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1244 1246first strand
Strand 2
D
350 356anti-parallel
Strand 3
D
447 448parallel
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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1269 1270first strand
Strand 2
D
345 346anti-parallel
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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1335 1338first strand
Strand 2
D
21 24anti-parallel
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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
106 112first strand
Strand 2
D
238 241anti-parallel
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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
159 160first strand
Strand 2
D
144 146anti-parallel
Strand 3
D
178 179anti-parallel
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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
366 369first strand
Strand 2
D
439 442parallel
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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
526 527first strand
Strand 2
D
547 556parallel
Strand 3
D
564 573anti-parallel
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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
820 822first strand
Strand 2
D
880 882anti-parallel
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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
951 952first strand
Strand 2
D
1015 1016anti-parallel
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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
957 961first strand
Strand 2
D
981 985anti-parallel
Strand 3
D
991 996anti-parallel
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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
965 967first strand
Strand 2
D
973 975anti-parallel
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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1034 1035first strand
Strand 2
D
1080 1081anti-parallel
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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1046 1048first strand
Strand 2
D
1059 1061anti-parallel
Strand 3
D
1105 1107anti-parallel
Strand 4
D
1122 1123anti-parallel
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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1077 1078first strand
Strand 2
D
1099 1100anti-parallel
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There are 3 strands in AE9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1176 1178first strand
Strand 2
D
1161 1164anti-parallel
Strand 3
D
1203 1204anti-parallel
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There are 3 strands in AF1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1279 1281first strand
Strand 2
D
1263 1268anti-parallel
Strand 3
D
1301 1304anti-parallel
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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
5 6first strand
Strand 2
G
73 74parallel
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There are 4 strands in AF3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
101 103first strand
Strand 2
G
91 94anti-parallel
Strand 3
G
144 152anti-parallel
Strand 4
G
136 141anti-parallel
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