Analysis of interatomic Contacts of Structural Units in PDB entry:
6RIN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6RIN entry

There are 9 chains in PDB entry 6RIN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
N
A 12 G 38
T
C 2 T 28
F
MET 1VAL 156
A
GLU 7LEU 234
B
SER 4VAL 232
C
VAL 2GLU 1342
D
GLU 16ARG 1373
E
ALA 2GLU 74
R
U 1 U 13
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are114 helices in PDB entry 6RIN. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
F
7 25Right-handed alpha
Helix 2
AA2
F
25 38Right-handed alpha
Helix 3
AA3
F
46 71Right-handed alpha
Helix 4
AA4
F
122 127Right-handed alpha
Helix 5
AA5
A
34 50Right-handed alpha
Helix 6
AA6
A
77 87Right-handed alpha
Helix 7
AA7
A
113 115Right-handed 310
Helix 8
AA8
A
157 162Right-handed alpha
Helix 9
AA9
A
212 229Right-handed alpha
Helix 10
AB1
A
230 233Right-handed 310
Helix 11
AB2
B
35 50Right-handed alpha
Helix 12
AB3
B
77 88Right-handed alpha
Helix 13
AB4
B
111 115Right-handed 310
Helix 14
AB5
B
154 161Right-handed alpha
Helix 15
AB6
B
212 229Right-handed alpha
Helix 16
AB7
B
230 232Right-handed 310
Helix 17
AB8
C
28 39Right-handed alpha
Helix 18
AB9
C
48 57Right-handed alpha
Helix 19
AC1
C
81 89Right-handed alpha
Helix 20
AC2
C
163 167Right-handed 310
Helix 21
AC3
C
206 213Right-handed alpha
Helix 22
AC4
C
216 225Right-handed alpha
Helix 23
AC5
C
242 247Right-handed 310
Helix 24
AC6
C
270 281Right-handed alpha
Helix 25
AC7
C
289 294Right-handed alpha
Helix 26
AC8
C
318 328Right-handed alpha
Helix 27
AC9
C
345 354Right-handed alpha
Helix 28
AD1
C
358 371Right-handed alpha
Helix 29
AD2
C
377 386Right-handed alpha
Helix 30
AD3
C
398 408Right-handed alpha
Helix 31
AD4
C
421 438Right-handed alpha
Helix 32
AD5
C
455 480Right-handed alpha
Helix 33
AD6
C
495 508Right-handed alpha
Helix 34
AD7
C
519 528Right-handed alpha
Helix 35
AD8
C
545 549Right-handed 310
Helix 36
AD9
C
608 614Right-handed 310
Helix 37
AE1
C
657 661Right-handed 310
Helix 38
AE2
C
662 666Right-handed 310
Helix 39
AE3
C
670 674Right-handed 310
Helix 40
AE4
C
675 688Right-handed alpha
Helix 41
AE5
C
704 712Right-handed alpha
Helix 42
AE6
C
820 826Right-handed alpha
Helix 43
AE7
C
858 865Right-handed alpha
Helix 44
AE8
C
942 980Right-handed alpha
Helix 45
AE9
C
985 990Right-handed alpha
Helix 46
AF1
C
1005 1038Right-handed alpha
Helix 47
AF2
C
1081 1085Right-handed 310
Helix 48
AF3
C
1101 1106Right-handed alpha
Helix 49
AF4
C
1109 1134Right-handed alpha
Helix 50
AF5
C
1137 1151Right-handed alpha
Helix 51
AF6
C
1160 1164Right-handed 310
Helix 52
AF7
C
1167 1177Right-handed alpha
Helix 53
AF8
C
1185 1189Right-handed 310
Helix 54
AF9
C
1191 1202Right-handed alpha
Helix 55
AG1
C
1238 1242Right-handed 310
Helix 56
AG2
C
1271 1281Right-handed alpha
Helix 57
AG3
C
1284 1292Right-handed alpha
Helix 58
AG4
C
1297 1309Right-handed alpha
Helix 59
AG5
C
1321 1332Right-handed alpha
Helix 60
AG6
D
26 34Right-handed alpha
Helix 61
AG7
D
77 81Right-handed 310
Helix 62
AG8
D
94 100Right-handed 310
Helix 63
AG9
D
122 129Right-handed alpha
Helix 64
AH1
D
131 140Right-handed alpha
Helix 65
AH2
D
161 173Right-handed alpha
Helix 66
AH3
D
181 192Right-handed alpha
Helix 67
AH4
D
194 207Right-handed alpha
Helix 68
AH5
D
210 230Right-handed alpha
Helix 69
AH6
D
233 236Right-handed 310
Helix 70
AH7
D
264 286Right-handed alpha
Helix 71
AH8
D
288 308Right-handed alpha
Helix 72
AH9
D
326 332Right-handed alpha
Helix 73
AI1
D
337 342Right-handed alpha
Helix 74
AI2
D
370 377Right-handed alpha
Helix 75
AI3
D
377 389Right-handed alpha
Helix 76
AI4
D
393 404Right-handed alpha
Helix 77
AI5
D
406 417Right-handed alpha
Helix 78
AI6
D
430 432Right-handed 310
Helix 79
AI7
D
450 454Right-handed 310
Helix 80
AI8
D
473 485Right-handed alpha
Helix 81
AI9
D
486 489Right-handed 310
Helix 82
AJ1
D
505 514Right-handed alpha
Helix 83
AJ2
D
529 540Right-handed alpha
Helix 84
AJ3
D
574 581Right-handed alpha
Helix 85
AJ4
D
589 593Right-handed 310
Helix 86
AJ5
D
597 613Right-handed alpha
Helix 87
AJ6
D
614 636Right-handed alpha
Helix 88
AJ7
D
640 644Right-handed 310
Helix 89
AJ8
D
649 671Right-handed alpha
Helix 90
AJ9
D
674 703Right-handed alpha
Helix 91
AK1
D
720 728Right-handed alpha
Helix 92
AK2
D
733 742Right-handed alpha
Helix 93
AK3
D
768 802Right-handed alpha
Helix 94
AK4
D
834 840Right-handed alpha
Helix 95
AK5
D
865 874Right-handed alpha
Helix 96
AK6
D
896 900Right-handed 310
Helix 97
AK7
D
915 925Right-handed alpha
Helix 98
AK8
D
926 930Right-handed 310
Helix 99
AK9
D
940 946Right-handed alpha
Helix 100
AL1
D
1051 1055Right-handed 310
Helix 101
AL2
D
1137 1147Right-handed alpha
Helix 102
AL3
D
1216 1224Right-handed alpha
Helix 103
AL4
D
1225 1245Right-handed alpha
Helix 104
AL5
D
1250 1261Right-handed alpha
Helix 105
AL6
D
1282 1295Right-handed alpha
Helix 106
AL7
D
1308 1313Right-handed alpha
Helix 107
AL8
D
1319 1324Right-handed alpha
Helix 108
AL9
D
1328 1339Right-handed alpha
Helix 109
AM1
D
1347 1354Right-handed alpha
Helix 110
AM2
D
1360 1373Right-handed alpha
Helix 111
AM3
E
6 13Right-handed alpha
Helix 112
AM4
E
17 32Right-handed alpha
Helix 113
AM5
E
45 56Right-handed alpha
Helix 114
AM6
E
60 73Right-handed alpha
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There are 54 sheets in PDB entry 6RIN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
5 6first strand
Strand 2
F
73 74parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
100 104first strand
Strand 2
F
90 94anti-parallel
Strand 3
F
148 154anti-parallel
Strand 4
F
136 137anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
140 141first strand
Strand 2
F
144 145anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
12 17first strand
Strand 2
A
23 32anti-parallel
Strand 3
A
198 206anti-parallel
Strand 4
A
182 189anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
97 104first strand
Strand 2
A
140 147anti-parallel
Strand 3
A
56 61anti-parallel
Strand 4
A
171 172anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
91 92first strand
Strand 2
A
121 122anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
108 111first strand
Strand 2
A
129 133anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
151 153first strand
Strand 2
A
175 177anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
13 18first strand
Strand 2
B
24 31anti-parallel
Strand 3
B
198 207anti-parallel
Strand 4
B
180 190anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
97 101first strand
Strand 2
B
142 149anti-parallel
Strand 3
B
53 61anti-parallel
Strand 4
B
171 172anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
90 91first strand
Strand 2
B
122 123anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
104 105first strand
Strand 2
B
139 140anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
152 153first strand
Strand 2
B
175 176anti-parallel
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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
13 14first strand
Strand 2
C
1182 1183parallel
Strand 3
C
700 701parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
59 60first strand
Strand 2
C
66 75anti-parallel
Strand 3
C
96 105anti-parallel
Strand 4
C
113 117anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
59 60first strand
Strand 2
C
66 75anti-parallel
Strand 3
C
96 105anti-parallel
Strand 4
C
122 123anti-parallel
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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
143 144first strand
Strand 2
C
513 514anti-parallel
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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
451 453first strand
Strand 2
C
147 151anti-parallel
Strand 3
C
530 531parallel
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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
154 158first strand
Strand 2
C
173 177anti-parallel
Strand 3
C
185 187anti-parallel
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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
195 196first strand
Strand 2
C
204 205anti-parallel
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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
227 230first strand
Strand 2
C
333 336anti-parallel
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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
255 257first strand
Strand 2
C
260 263anti-parallel
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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
580 581first strand
Strand 2
C
587 594anti-parallel
Strand 3
C
599 606anti-parallel
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There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
580 581first strand
Strand 2
C
587 594anti-parallel
Strand 3
C
652 653anti-parallel
Strand 4
C
616 617parallel
Strand 5
C
634 637anti-parallel
Strand 6
C
643 645anti-parallel
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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
623 624first strand
Strand 2
C
628 629anti-parallel
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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
716 717first strand
Strand 2
C
782 785anti-parallel
Strand 3
C
768 769anti-parallel
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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
749 752first strand
Strand 2
C
731 736anti-parallel
Strand 3
C
722 727anti-parallel
Strand 4
C
776 777anti-parallel
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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
757 758first strand
Strand 2
C
764 765anti-parallel
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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
789 790first strand
Strand 2
C
793 794anti-parallel
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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
801 804first strand
Strand 2
C
1225 1229anti-parallel
Strand 3
C
1209 1210anti-parallel
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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
818 819first strand
Strand 2
C
1079 1080parallel
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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
830 832first strand
Strand 2
C
1056 1058anti-parallel
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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
835 839first strand
Strand 2
C
1048 1053anti-parallel
Strand 3
C
931 935anti-parallel
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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
842 843first strand
Strand 2
C
846 847anti-parallel
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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
882 884first strand
Strand 2
C
918 919anti-parallel
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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
887 888first strand
Strand 2
C
914 915anti-parallel
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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1066 1067first strand
Strand 2
C
1233 1234anti-parallel
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There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1244 1246first strand
Strand 2
D
350 356anti-parallel
Strand 3
D
465 469anti-parallel
Strand 4
D
421 425anti-parallel
Strand 5
D
434 437anti-parallel
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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1244 1246first strand
Strand 2
D
350 356anti-parallel
Strand 3
D
447 448parallel
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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1335 1338first strand
Strand 2
D
21 24anti-parallel
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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
36 37first strand
Strand 2
D
103 112parallel
Strand 3
D
238 244anti-parallel
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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
159 160first strand
Strand 2
D
144 146anti-parallel
Strand 3
D
178 179anti-parallel
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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
366 369first strand
Strand 2
D
439 442parallel
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There are 3 strands in AE8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
526 527first strand
Strand 2
D
547 556parallel
Strand 3
D
564 573anti-parallel
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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
706 707first strand
Strand 2
D
714 715anti-parallel
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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
820 822first strand
Strand 2
D
880 882anti-parallel
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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
825 826first strand
Strand 2
D
831 833anti-parallel
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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
848 849first strand
Strand 2
D
856 858anti-parallel
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There are 4 strands in AF4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
991 995first strand
Strand 2
D
981 985anti-parallel
Strand 3
D
956 961anti-parallel
Strand 4
D
1010 1011anti-parallel
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There are 3 strands in AF5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
965 967first strand
Strand 2
D
973 975anti-parallel
Strand 3
D
1002 1003anti-parallel
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There are 4 strands in AF6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1098 1100first strand
Strand 2
D
1077 1081anti-parallel
Strand 3
D
1033 1035anti-parallel
Strand 4
D
1114 1115anti-parallel
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There are 4 strands in AF7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1046 1047first strand
Strand 2
D
1059 1061anti-parallel
Strand 3
D
1106 1107anti-parallel
Strand 4
D
1122 1123anti-parallel
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There are 3 strands in AF8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1162 1164first strand
Strand 2
D
1173 1178anti-parallel
Strand 3
D
1187 1190anti-parallel
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There are 3 strands in AF9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1279 1281first strand
Strand 2
D
1263 1268anti-parallel
Strand 3
D
1301 1304anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il