Analysis of interatomic Contacts of Structural Units in PDB entry:
6RZ5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6RZ5 entry

There are 2 chains in PDB entry 6RZ5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
CYS 14GLY 299
B
CYS 14GLY 299
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 33 helices in PDB entry 6RZ5. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
17 50Right-handed alpha
Helix 2
AA2
A
56 74Right-handed alpha
Helix 3
AA3
A
75 85Right-handed alpha
Helix 4
AA4
A
91 127Right-handed alpha
Helix 5
AA5
A
130 135Right-handed alpha
Helix 6
AA6
A
136 155Right-handed alpha
Helix 7
AA7
A
156 159Right-handed 310
Helix 8
AA8
A
183 198Right-handed alpha
Helix 9
AA9
A
198 1018Right-handed alpha
Helix 10
AB1
A
1027 1043Right-handed alpha
Helix 11
AB2
A
1055 1075Right-handed alpha
Helix 12
AB3
A
1093 1098Right-handed alpha
Helix 13
AB4
A
226 245Right-handed alpha
Helix 14
AB5
A
245 260Right-handed alpha
Helix 15
AB6
A
266 286Right-handed alpha
Helix 16
AB7
A
289 299Right-handed alpha
Helix 17
AB8
B
17 50Right-handed alpha
Helix 18
AB9
B
56 74Right-handed alpha
Helix 19
AC1
B
75 85Right-handed alpha
Helix 20
AC2
B
91 127Right-handed alpha
Helix 21
AC3
B
130 135Right-handed alpha
Helix 22
AC4
B
136 155Right-handed alpha
Helix 23
AC5
B
156 159Right-handed 310
Helix 24
AC6
B
183 198Right-handed alpha
Helix 25
AC7
B
198 1018Right-handed alpha
Helix 26
AC8
B
1022 1043Right-handed alpha
Helix 27
AC9
B
1055 1081Right-handed alpha
Helix 28
AD1
B
1083 1089Right-handed alpha
Helix 29
AD2
B
1090 1102Right-handed alpha
Helix 30
AD3
B
226 245Right-handed alpha
Helix 31
AD4
B
245 260Right-handed alpha
Helix 32
AD5
B
266 286Right-handed alpha
Helix 33
AD6
B
289 298Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 6RZ5. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
164 165first strand
Strand 2
A
171 172anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
164 165first strand
Strand 2
B
171 172anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il