Analysis of interatomic Contacts of Structural Units in PDB entry:
6S22


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6S22 entry

There are 2 chains in PDB entry 6S22 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 94ASN 630
F
 ASN 170ALA 181
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 6S22. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
120 124Right-handed 310
Helix 2
AA2
A
132 147Right-handed alpha
Helix 3
AA3
A
149 154Right-handed alpha
Helix 4
AA4
A
168 173Right-handed alpha
Helix 5
AA5
A
195 210Right-handed alpha
Helix 6
AA6
A
227 230Right-handed 310
Helix 7
AA7
A
231 240Right-handed alpha
Helix 8
AA8
A
254 266Right-handed alpha
Helix 9
AA9
A
284 295Right-handed alpha
Helix 10
AB1
A
341 348Right-handed alpha
Helix 11
AB2
A
369 375Right-handed alpha
Helix 12
AB3
A
387 399Right-handed alpha
Helix 13
AB4
A
427 442Right-handed alpha
Helix 14
AB5
A
445 453Right-handed alpha
Helix 15
AB6
A
453 462Right-handed alpha
Helix 16
AB7
A
468 478Right-handed alpha
Helix 17
AB8
A
482 490Right-handed alpha
Helix 18
AB9
A
537 541Right-handed 310
Helix 19
AC1
A
582 585Right-handed 310
Helix 20
AC2
A
620 623Right-handed 310
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There are 7 sheets in PDB entry 6S22. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
244 249first strand
Strand 2
A
215 223parallel
Strand 3
A
185 191parallel
Strand 4
A
270 274parallel
Strand 5
A
365 368anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
278 280first strand
Strand 2
A
402 414anti-parallel
Strand 3
A
298 307parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
278 280first strand
Strand 2
A
402 414anti-parallel
Strand 3
A
355 356anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
325 329first strand
Strand 2
A
335 339anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
568 571first strand
Strand 2
A
558 561anti-parallel
Strand 3
A
550 552anti-parallel
Strand 4
A
542 544anti-parallel
Strand 5
A
503 509anti-parallel
Strand 6
A
625 628anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
515 517first strand
Strand 2
A
529 531anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
587 589first strand
Strand 2
A
595 597anti-parallel
Strand 3
A
602 605anti-parallel
Strand 4
A
612 614anti-parallel
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