Analysis of interatomic Contacts of Structural Units in PDB entry:
6THQ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6THQ entry

There are 3 chains in PDB entry 6THQ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY -1	TYR 295
B	HIS -5	TYR 295
C	SER 0	TYR 295

There are 31 helices in PDB entry 6THQ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	13	15	Right-handed 310
Helix 2	AA2	A	21	27	Right-handed alpha
Helix 3	AA3	A	47	63	Right-handed alpha
Helix 4	AA4	A	69	84	Right-handed alpha
Helix 5	AA5	A	151	153	Right-handed 310
Helix 6	AA6	A	154	168	Right-handed alpha
Helix 7	AA7	A	202	206	Right-handed 310
Helix 8	AA8	A	210	223	Right-handed alpha
Helix 9	AA9	A	234	239	Right-handed alpha
Helix 10	AB1	A	266	281	Right-handed alpha
Helix 11	AB2	A	284	289	Right-handed 310
Helix 12	AB3	B	21	27	Right-handed alpha
Helix 13	AB4	B	47	63	Right-handed alpha
Helix 14	AB5	B	69	84	Right-handed alpha
Helix 15	AB6	B	151	153	Right-handed 310
Helix 16	AB7	B	154	168	Right-handed alpha
Helix 17	AB8	B	202	206	Right-handed 310
Helix 18	AB9	B	210	223	Right-handed alpha
Helix 19	AC1	B	233	239	Right-handed alpha
Helix 20	AC2	B	266	281	Right-handed alpha
Helix 21	AC3	B	284	289	Right-handed 310
Helix 22	AC4	C	21	27	Right-handed alpha
Helix 23	AC5	C	47	63	Right-handed alpha
Helix 24	AC6	C	69	84	Right-handed alpha
Helix 25	AC7	C	151	153	Right-handed 310
Helix 26	AC8	C	154	168	Right-handed alpha
Helix 27	AC9	C	202	206	Right-handed 310
Helix 28	AD1	C	210	224	Right-handed alpha
Helix 29	AD2	C	233	239	Right-handed alpha
Helix 30	AD3	C	266	281	Right-handed alpha
Helix 31	AD4	C	284	289	Right-handed 310

There are 11 sheets in PDB entry 6THQ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2	5	first strand
Strand 2	A	8	11	anti-parallel

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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	291	293	first strand
Strand 2	A	43	46	anti-parallel
Strand 3	A	34	38	anti-parallel
Strand 4	A	90	98	anti-parallel
Strand 5	A	112	120	anti-parallel

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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	255	258	first strand
Strand 2	A	130	134	parallel
Strand 3	A	172	176	parallel
Strand 4	A	182	185	anti-parallel

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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	227	229	first strand
Strand 2	A	197	200	parallel
Strand 3	A	189	194	anti-parallel
Strand 4	A	242	247	anti-parallel
Strand 5	A	251	254	anti-parallel

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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2	5	first strand
Strand 2	B	8	11	anti-parallel

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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	291	293	first strand
Strand 2	B	43	46	anti-parallel
Strand 3	B	34	38	anti-parallel
Strand 4	B	90	97	anti-parallel
Strand 5	B	113	120	anti-parallel

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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	255	258	first strand
Strand 2	B	130	134	parallel
Strand 3	B	172	176	parallel
Strand 4	B	182	185	anti-parallel

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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	227	229	first strand
Strand 2	B	197	200	parallel
Strand 3	B	189	194	anti-parallel
Strand 4	B	242	247	anti-parallel
Strand 5	B	251	254	anti-parallel

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There are 7 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	8	11	first strand
Strand 2	C	2	5	anti-parallel
Strand 3	C	113	120	anti-parallel
Strand 4	C	90	97	anti-parallel
Strand 5	C	34	38	anti-parallel
Strand 6	C	43	46	anti-parallel
Strand 7	C	291	293	anti-parallel

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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	255	258	first strand
Strand 2	C	130	134	parallel
Strand 3	C	172	176	parallel
Strand 4	C	182	185	anti-parallel

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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	227	229	first strand
Strand 2	C	197	200	parallel
Strand 3	C	189	194	anti-parallel
Strand 4	C	242	247	anti-parallel
Strand 5	C	251	254	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6THQ

Analysis of interatomic Contacts of Structural Units in PDB entry:
6THQ