Analysis of interatomic Contacts of Structural Units in PDB entry:
6U0K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6U0K entry

There are 2 chains in PDB entry 6U0K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 LEU 8LYS 299
A
 LEU 8GLU 298
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 6U0K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
29 33Right-handed 310
Helix 2
AA2
B
60 71Right-handed alpha
Helix 3
AA3
B
100 107Right-handed alpha
Helix 4
AA4
B
114 135Right-handed alpha
Helix 5
AA5
B
143 145Right-handed 310
Helix 6
AA6
B
189 193Right-handed 310
Helix 7
AA7
B
194 199Right-handed alpha
Helix 8
AA8
B
204 222Right-handed alpha
Helix 9
AA9
B
231 242Right-handed alpha
Helix 10
AB1
B
243 249Right-handed 310
Helix 11
AB2
B
254 265Right-handed alpha
Helix 12
AB3
B
272 287Right-handed alpha
Helix 13
AB4
B
295 299Right-handed 310
Helix 14
AB5
A
60 71Right-handed alpha
Helix 15
AB6
A
100 107Right-handed alpha
Helix 16
AB7
A
108 112Right-handed 310
Helix 17
AB8
A
114 135Right-handed alpha
Helix 18
AB9
A
143 145Right-handed 310
Helix 19
AC1
A
194 199Right-handed alpha
Helix 20
AC2
A
204 222Right-handed alpha
Helix 21
AC3
A
231 242Right-handed alpha
Helix 22
AC4
A
243 251Right-handed 310
Helix 23
AC5
A
252 253Right-handed 310
Helix 24
AC6
A
254 265Right-handed alpha
Helix 25
AC7
A
272 287Right-handed alpha
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There are 6 sheets in PDB entry 6U0K. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 17first strand
Strand 2
B
21 28anti-parallel
Strand 3
B
34 40anti-parallel
Strand 4
B
45 53anti-parallel
Strand 5
B
89 95anti-parallel
Strand 6
B
80 85anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
137 138first strand
Strand 2
B
168 169anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
147 149first strand
Strand 2
B
159 161anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 17first strand
Strand 2
A
21 28anti-parallel
Strand 3
A
34 40anti-parallel
Strand 4
A
45 53anti-parallel
Strand 5
A
89 95anti-parallel
Strand 6
A
80 85anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 138first strand
Strand 2
A
168 169anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 149first strand
Strand 2
A
159 161anti-parallel
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