Analysis of interatomic Contacts of Structural Units in PDB entry:
6UHA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6UHA entry

There are 2 chains in PDB entry 6UHA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 PHE 849SER 1054
A
 ILE 850ASP 1055
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 6UHA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
862 864Right-handed 310
Helix 2
AA2
B
865 887Right-handed alpha
Helix 3
AA3
B
912 933Right-handed alpha
Helix 4
AA4
B
941 947Right-handed alpha
Helix 5
AA5
B
954 958Right-handed 310
Helix 6
AA6
B
976 1001Right-handed alpha
Helix 7
AA7
B
1021 1025Right-handed 310
Helix 8
AA8
B
1026 1047Right-handed alpha
Helix 9
AA9
A
865 886Right-handed alpha
Helix 10
AB1
A
912 933Right-handed alpha
Helix 11
AB2
A
954 958Right-handed 310
Helix 12
AB3
A
976 1001Right-handed alpha
Helix 13
AB4
A
1021 1025Right-handed 310
Helix 14
AB5
A
1026 1047Right-handed alpha
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There are 4 sheets in PDB entry 6UHA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
890 891first strand
Strand 2
B
901 902parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
936 939first strand
Strand 2
B
1049 1052anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
890 891first strand
Strand 2
A
901 902parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
936 939first strand
Strand 2
A
1049 1052anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il