Analysis of interatomic Contacts of Structural Units in PDB entry:
6UHE

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6UHE entry

There are 4 chains in PDB entry 6UHE (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 848	SER 1054
B	SER 848	PRO 1053
C	ALA 847	SER 1054
D	SER 848	ASP 1055

There are 33 helices in PDB entry 6UHE. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	862	864	Right-handed 310
Helix 2	AA2	A	865	888	Right-handed alpha
Helix 3	AA3	A	907	911	Right-handed 310
Helix 4	AA4	A	914	933	Right-handed alpha
Helix 5	AA5	A	942	946	Right-handed 310
Helix 6	AA6	A	954	958	Right-handed 310
Helix 7	AA7	A	976	1001	Right-handed alpha
Helix 8	AA8	A	1021	1025	Right-handed 310
Helix 9	AA9	A	1026	1047	Right-handed alpha
Helix 10	AB1	B	862	865	Right-handed 310
Helix 11	AB2	B	866	887	Right-handed alpha
Helix 12	AB3	B	907	911	Right-handed 310
Helix 13	AB4	B	912	933	Right-handed alpha
Helix 14	AB5	B	941	948	Right-handed 310
Helix 15	AB6	B	954	958	Right-handed 310
Helix 16	AB7	B	976	1000	Right-handed alpha
Helix 17	AB8	B	1026	1047	Right-handed alpha
Helix 18	AB9	C	862	864	Right-handed 310
Helix 19	AC1	C	865	887	Right-handed alpha
Helix 20	AC2	C	907	911	Right-handed 310
Helix 21	AC3	C	912	933	Right-handed alpha
Helix 22	AC4	C	944	948	Right-handed 310
Helix 23	AC5	C	954	958	Right-handed 310
Helix 24	AC6	C	976	1000	Right-handed alpha
Helix 25	AC7	C	1021	1025	Right-handed 310
Helix 26	AC8	C	1026	1046	Right-handed alpha
Helix 27	AC9	D	862	864	Right-handed 310
Helix 28	AD1	D	865	887	Right-handed alpha
Helix 29	AD2	D	912	933	Right-handed alpha
Helix 30	AD3	D	941	946	Right-handed 310
Helix 31	AD4	D	954	958	Right-handed 310
Helix 32	AD5	D	976	999	Right-handed alpha
Helix 33	AD6	D	1026	1047	Right-handed alpha

There are 11 sheets in PDB entry 6UHE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	890	891	first strand
Strand 2	A	901	902	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	936	939	first strand
Strand 2	A	1049	1052	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1004	1005	first strand
Strand 2	A	1015	1016	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	890	891	first strand
Strand 2	B	901	902	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	936	939	first strand
Strand 2	B	1049	1052	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1004	1005	first strand
Strand 2	B	1015	1016	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	890	891	first strand
Strand 2	C	901	902	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	936	939	first strand
Strand 2	C	1049	1052	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	890	891	first strand
Strand 2	D	901	902	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	936	938	first strand
Strand 2	D	1050	1052	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1004	1005	first strand
Strand 2	D	1015	1016	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6UHE

Analysis of interatomic Contacts of Structural Units in PDB entry:
6UHE