Analysis of interatomic Contacts of Structural Units in PDB entry:
6ULG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ULG entry

There are 9 chains in PDB entry 6ULG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
L	ASN 2	THR 568
A	ALA 2	GLU 122
B	MET 1	SER 125
C	MET 1	SER 91
D	ALA 4	ARG 92
E	ASP 49	GLY 159
F	LYS 7	LYS 299
G	LYS 61	GLY 370
N	GLU 41	ALA 1110

There are 67 helices in PDB entry 6ULG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	L	114	130	Right-handed alpha
Helix 2	AA2	L	178	184	Right-handed alpha
Helix 3	AA3	L	185	215	Right-handed alpha
Helix 4	AA4	L	249	267	Right-handed alpha
Helix 5	AA5	L	282	291	Right-handed alpha
Helix 6	AA6	L	348	357	Right-handed alpha
Helix 7	AA7	L	357	371	Right-handed alpha
Helix 8	AA8	L	380	392	Right-handed alpha
Helix 9	AA9	L	393	395	Right-handed 310
Helix 10	AB1	L	427	432	Right-handed alpha
Helix 11	AB2	L	480	492	Right-handed alpha
Helix 12	AB3	L	496	524	Right-handed alpha
Helix 13	AB4	L	530	539	Right-handed alpha
Helix 14	AB5	L	543	554	Right-handed alpha
Helix 15	AB6	L	558	568	Right-handed alpha
Helix 16	AB7	A	3	13	Right-handed alpha
Helix 17	AB8	A	14	16	Right-handed 310
Helix 18	AB9	A	46	51	Right-handed alpha
Helix 19	AC1	A	51	61	Right-handed alpha
Helix 20	AC2	A	99	110	Right-handed alpha
Helix 21	AC3	A	110	118	Right-handed alpha
Helix 22	AC4	A	119	121	Right-handed 310
Helix 23	AC5	B	3	13	Right-handed alpha
Helix 24	AC6	B	41	64	Right-handed alpha
Helix 25	AC7	B	100	123	Right-handed alpha
Helix 26	AC8	C	2	14	Right-handed alpha
Helix 27	AC9	C	38	41	Right-handed 310
Helix 28	AD1	C	42	54	Right-handed alpha
Helix 29	AD2	D	6	10	Right-handed 310
Helix 30	AD3	D	36	52	Right-handed alpha
Helix 31	AD4	E	50	65	Right-handed alpha
Helix 32	AD5	E	78	96	Right-handed alpha
Helix 33	AD6	E	97	99	Right-handed 310
Helix 34	AD7	E	114	120	Right-handed alpha
Helix 35	AD8	E	125	144	Right-handed alpha
Helix 36	AD9	F	21	28	Right-handed alpha
Helix 37	AE1	F	70	77	Right-handed alpha
Helix 38	AE2	F	98	117	Right-handed alpha
Helix 39	AE3	F	136	152	Right-handed alpha
Helix 40	AE4	F	167	180	Right-handed alpha
Helix 41	AE5	F	185	198	Right-handed alpha
Helix 42	AE6	F	226	244	Right-handed alpha
Helix 43	AE7	F	282	298	Right-handed alpha
Helix 44	AE8	G	74	83	Right-handed alpha
Helix 45	AE9	G	88	92	Right-handed 310
Helix 46	AF1	G	131	136	Right-handed alpha
Helix 47	AF2	G	151	168	Right-handed alpha
Helix 48	AF3	G	184	205	Right-handed alpha
Helix 49	AF4	G	223	235	Right-handed alpha
Helix 50	AF5	G	239	254	Right-handed alpha
Helix 51	AF6	G	278	300	Right-handed alpha
Helix 52	AF7	G	349	367	Right-handed alpha
Helix 53	AF8	N	134	144	Right-handed alpha
Helix 54	AF9	N	322	334	Right-handed alpha
Helix 55	AG1	N	336	360	Right-handed alpha
Helix 56	AG2	N	364	391	Right-handed alpha
Helix 57	AG3	N	398	406	Right-handed alpha
Helix 58	AG4	N	411	428	Right-handed alpha
Helix 59	AG5	N	433	444	Right-handed alpha
Helix 60	AG6	N	484	492	Right-handed alpha
Helix 61	AG7	N	512	522	Right-handed alpha
Helix 62	AG8	N	523	525	Right-handed 310
Helix 63	AG9	N	566	570	Right-handed 310
Helix 64	AH1	N	974	987	Right-handed alpha
Helix 65	AH2	N	1028	1044	Right-handed alpha
Helix 66	AH3	N	1049	1072	Right-handed alpha
Helix 67	AH4	N	1096	1103	Right-handed alpha

There are 12 sheets in PDB entry 6ULG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	16	22	first strand
Strand 2	L	4	10	anti-parallel
Strand 3	L	167	176	anti-parallel
Strand 4	L	150	159	anti-parallel
Strand 5	L	140	144	anti-parallel
Strand 6	N	155	158	anti-parallel
Strand 7	N	167	175	anti-parallel
Strand 8	N	309	316	anti-parallel
Strand 9	N	50	54	anti-parallel
Strand 10	N	61	64	anti-parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	16	22	first strand
Strand 2	L	4	10	anti-parallel
Strand 3	L	167	176	anti-parallel
Strand 4	L	150	159	anti-parallel
Strand 5	L	140	144	anti-parallel
Strand 6	N	155	158	anti-parallel
Strand 7	N	167	175	anti-parallel
Strand 8	N	179	182	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	95	98	first strand
Strand 2	L	105	108	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	271	272	first strand
Strand 2	N	529	530	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	402	403	first strand
Strand 2	L	417	420	parallel
Strand 3	L	373	377	parallel
Strand 4	L	436	442	parallel
Strand 5	L	464	468	anti-parallel

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There are 10 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	31	36	first strand
Strand 2	A	19	25	anti-parallel
Strand 3	A	88	95	anti-parallel
Strand 4	A	78	85	anti-parallel
Strand 5	A	68	75	anti-parallel
Strand 6	B	69	76	anti-parallel
Strand 7	B	79	84	anti-parallel
Strand 8	B	90	94	anti-parallel
Strand 9	B	21	25	anti-parallel
Strand 10	B	31	36	anti-parallel

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There are 10 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	30	34	first strand
Strand 2	C	20	24	anti-parallel
Strand 3	C	83	88	anti-parallel
Strand 4	C	72	77	anti-parallel
Strand 5	C	65	69	anti-parallel
Strand 6	D	65	68	anti-parallel
Strand 7	D	73	80	anti-parallel
Strand 8	D	83	90	anti-parallel
Strand 9	D	15	22	anti-parallel
Strand 10	D	25	31	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	9	13	first strand
Strand 2	F	85	93	parallel
Strand 3	F	121	127	parallel
Strand 4	F	158	161	parallel

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There are 10 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	213	218	first strand
Strand 2	F	202	207	anti-parallel
Strand 3	F	270	276	anti-parallel
Strand 4	F	260	265	anti-parallel
Strand 5	F	249	255	anti-parallel
Strand 6	G	315	320	anti-parallel
Strand 7	G	324	330	anti-parallel
Strand 8	G	335	342	anti-parallel
Strand 9	G	258	263	anti-parallel
Strand 10	G	269	272	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	100	101	first strand
Strand 2	G	113	116	anti-parallel
Strand 3	G	63	66	parallel
Strand 4	G	139	145	parallel
Strand 5	G	172	178	parallel
Strand 6	G	216	218	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	503	506	first strand
Strand 2	N	999	1002	parallel
Strand 3	N	1007	1010	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	532	535	first strand
Strand 2	N	558	561	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ULG

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ULG