Analysis of interatomic Contacts of Structural Units in PDB entry:
6VZ1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6VZ1 entry

There are 2 chains in PDB entry 6VZ1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 64TYR 481
B
 TRP 64TYR 481
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 6VZ1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
77 81Right-handed 310
Helix 2
AA2
A
87 101Right-handed alpha
Helix 3
AA3
A
102 111Right-handed alpha
Helix 4
AA4
A
118 126Right-handed alpha
Helix 5
AA5
A
131 156Right-handed alpha
Helix 6
AA6
A
160 178Right-handed alpha
Helix 7
AA7
A
178 186Right-handed alpha
Helix 8
AA8
A
190 202Right-handed alpha
Helix 9
AA9
A
202 226Right-handed alpha
Helix 10
AB1
A
243 247Right-handed 310
Helix 11
AB2
A
248 258Right-handed alpha
Helix 12
AB3
A
274 299Right-handed alpha
Helix 13
AB4
A
300 306Right-handed alpha
Helix 14
AB5
A
317 324Right-handed alpha
Helix 15
AB6
A
326 342Right-handed alpha
Helix 16
AB7
A
343 353Right-handed alpha
Helix 17
AB8
A
369 374Right-handed alpha
Helix 18
AB9
A
378 389Right-handed alpha
Helix 19
AC1
A
390 396Right-handed alpha
Helix 20
AC2
A
399 419Right-handed alpha
Helix 21
AC3
A
429 436Right-handed alpha
Helix 22
AC4
A
437 448Right-handed alpha
Helix 23
AC5
A
449 451Right-handed 310
Helix 24
AC6
A
452 464Right-handed alpha
Helix 25
AC7
A
466 479Right-handed alpha
Helix 26
AC8
B
77 81Right-handed 310
Helix 27
AC9
B
87 101Right-handed alpha
Helix 28
AD1
B
102 111Right-handed alpha
Helix 29
AD2
B
118 126Right-handed alpha
Helix 30
AD3
B
131 156Right-handed alpha
Helix 31
AD4
B
160 178Right-handed alpha
Helix 32
AD5
B
178 186Right-handed alpha
Helix 33
AD6
B
190 202Right-handed alpha
Helix 34
AD7
B
202 226Right-handed alpha
Helix 35
AD8
B
243 247Right-handed 310
Helix 36
AD9
B
248 258Right-handed alpha
Helix 37
AE1
B
274 299Right-handed alpha
Helix 38
AE2
B
300 306Right-handed alpha
Helix 39
AE3
B
317 324Right-handed alpha
Helix 40
AE4
B
326 342Right-handed alpha
Helix 41
AE5
B
343 353Right-handed alpha
Helix 42
AE6
B
369 374Right-handed alpha
Helix 43
AE7
B
378 389Right-handed alpha
Helix 44
AE8
B
390 396Right-handed alpha
Helix 45
AE9
B
399 419Right-handed alpha
Helix 46
AF1
B
429 436Right-handed alpha
Helix 47
AF2
B
437 448Right-handed alpha
Helix 48
AF3
B
449 451Right-handed 310
Helix 49
AF4
B
452 464Right-handed alpha
Helix 50
AF5
B
466 479Right-handed alpha
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There are no sheets in PDB entry 6VZ1
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