Analysis of interatomic Contacts of Structural Units in PDB entry:
6WB0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6WB0 entry

There are 4 chains in PDB entry 6WB0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 4	LYS 558
B	ILE 5	GLN 428
C	C 134	A 203
D	G 1	G 79

There are 31 helices in PDB entry 6WB0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	30	44	Right-handed alpha
Helix 2	AA2	A	77	84	Right-handed alpha
Helix 3	AA3	A	96	100	Right-handed 310
Helix 4	AA4	A	114	118	Right-handed 310
Helix 5	AA5	A	121	126	Right-handed alpha
Helix 6	AA6	A	155	175	Right-handed alpha
Helix 7	AA7	A	194	211	Right-handed alpha
Helix 8	AA8	A	253	268	Right-handed alpha
Helix 9	AA9	A	276	281	Right-handed alpha
Helix 10	AB1	A	282	284	Right-handed 310
Helix 11	AB2	A	296	310	Right-handed alpha
Helix 12	AB3	A	363	383	Right-handed alpha
Helix 13	AB4	A	394	404	Right-handed alpha
Helix 14	AB5	A	473	489	Right-handed alpha
Helix 15	AB6	A	499	508	Right-handed alpha
Helix 16	AB7	A	515	527	Right-handed alpha
Helix 17	AB8	A	543	553	Right-handed alpha
Helix 18	AB9	B	27	44	Right-handed alpha
Helix 19	AC1	B	77	91	Right-handed alpha
Helix 20	AC2	B	98	103	Right-handed 310
Helix 21	AC3	B	112	118	Right-handed 310
Helix 22	AC4	B	121	126	Right-handed alpha
Helix 23	AC5	B	134	138	Right-handed 310
Helix 24	AC6	B	154	175	Right-handed alpha
Helix 25	AC7	B	194	212	Right-handed alpha
Helix 26	AC8	B	254	269	Right-handed alpha
Helix 27	AC9	B	277	285	Right-handed 310
Helix 28	AD1	B	296	312	Right-handed alpha
Helix 29	AD2	B	365	384	Right-handed alpha
Helix 30	AD3	B	394	402	Right-handed alpha
Helix 31	AD4	B	423	427	Right-handed 310

There are 11 sheets in PDB entry 6WB0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	105	108	first strand
Strand 2	A	188	191	anti-parallel
Strand 3	A	179	181	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	232	234	first strand
Strand 2	A	239	241	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	326	329	first strand
Strand 2	A	339	342	anti-parallel
Strand 3	A	348	351	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	389	391	first strand
Strand 2	A	414	416	parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	439	441	first strand
Strand 2	A	494	497	parallel
Strand 3	A	532	535	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	454	457	first strand
Strand 2	A	465	468	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	60	62	first strand
Strand 2	B	73	75	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	109	110	first strand
Strand 2	B	186	187	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	129	131	first strand
Strand 2	B	143	145	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	252	253	first strand
Strand 2	B	292	293	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	337	339	first strand
Strand 2	B	326	331	anti-parallel
Strand 3	B	388	390	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6WB0

Analysis of interatomic Contacts of Structural Units in PDB entry:
6WB0