Analysis of interatomic Contacts of Structural Units in PDB entry:
6WB2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6WB2 entry

There are 4 chains in PDB entry 6WB2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	C 134	A 203
D	G 1	G 79
A	SER 3	LYS 558
B	ILE 5	GLN 428

There are 30 helices in PDB entry 6WB2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	30	45	Right-handed alpha
Helix 2	AA2	A	79	84	Right-handed alpha
Helix 3	AA3	A	96	100	Right-handed 310
Helix 4	AA4	A	113	118	Right-handed 310
Helix 5	AA5	A	123	127	Right-handed 310
Helix 6	AA6	A	155	175	Right-handed alpha
Helix 7	AA7	A	194	211	Right-handed alpha
Helix 8	AA8	A	253	269	Right-handed alpha
Helix 9	AA9	A	276	283	Right-handed alpha
Helix 10	AB1	A	297	311	Right-handed alpha
Helix 11	AB2	A	363	383	Right-handed alpha
Helix 12	AB3	A	394	404	Right-handed alpha
Helix 13	AB4	A	473	488	Right-handed alpha
Helix 14	AB5	A	499	509	Right-handed alpha
Helix 15	AB6	A	515	527	Right-handed alpha
Helix 16	AB7	A	544	553	Right-handed alpha
Helix 17	AB8	B	27	44	Right-handed alpha
Helix 18	AB9	B	77	91	Right-handed alpha
Helix 19	AC1	B	99	103	Right-handed 310
Helix 20	AC2	B	111	116	Right-handed alpha
Helix 21	AC3	B	121	128	Right-handed 310
Helix 22	AC4	B	134	138	Right-handed 310
Helix 23	AC5	B	154	173	Right-handed alpha
Helix 24	AC6	B	194	211	Right-handed alpha
Helix 25	AC7	B	253	268	Right-handed alpha
Helix 26	AC8	B	278	283	Right-handed alpha
Helix 27	AC9	B	296	311	Right-handed alpha
Helix 28	AD1	B	364	383	Right-handed alpha
Helix 29	AD2	B	394	402	Right-handed alpha
Helix 30	AD3	B	422	426	Right-handed 310

There are 13 sheets in PDB entry 6WB2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	47	48	first strand
Strand 2	A	142	146	anti-parallel
Strand 3	A	129	132	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	60	63	first strand
Strand 2	A	72	75	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	105	107	first strand
Strand 2	A	187	191	anti-parallel
Strand 3	A	179	182	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	227	229	first strand
Strand 2	A	232	234	anti-parallel
Strand 3	A	239	241	anti-parallel
Strand 4	A	315	316	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	347	351	first strand
Strand 2	A	336	344	anti-parallel
Strand 3	A	326	333	anti-parallel
Strand 4	A	388	391	parallel
Strand 5	A	414	416	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	361	362	first strand
Strand 2	A	512	513	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	454	455	first strand
Strand 2	A	467	468	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	492	497	first strand
Strand 2	A	530	535	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	47	48	first strand
Strand 2	B	145	146	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	60	62	first strand
Strand 2	B	73	75	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	179	181	first strand
Strand 2	B	186	190	anti-parallel
Strand 3	B	106	110	anti-parallel
Strand 4	B	233	234	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	131	132	first strand
Strand 2	B	142	143	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	347	354	first strand
Strand 2	B	337	344	anti-parallel
Strand 3	B	326	331	anti-parallel
Strand 4	B	388	390	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6WB2

Analysis of interatomic Contacts of Structural Units in PDB entry:
6WB2