Analysis of interatomic Contacts of Structural Units in PDB entry:
6XBZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XBZ entry


Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 4 chains in PDB entry 6XBZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
H
 ALA 244PRO 308
I
 MET 1GLU 284
J
 LYS 10GLY 163
J
 PRO 165CYS 312
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 6XBZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
H
263 267Right-handed 310
Helix 2
AA2
H
270 275Right-handed 310
Helix 3
AA3
H
279 285Right-handed alpha
Helix 4
AA4
H
289 301Right-handed alpha
Helix 5
AA5
I
1 4Right-handed 310
Helix 6
AA6
I
5 10Right-handed alpha
Helix 7
AA7
I
15 37Right-handed alpha
Helix 8
AA8
I
49 71Right-handed alpha
Helix 9
AA9
I
76 94Right-handed alpha
Helix 10
AB1
I
100 116Right-handed alpha
Helix 11
AB2
I
121 128Right-handed alpha
Helix 12
AB3
I
132 154Right-handed alpha
Helix 13
AB4
I
163 178Right-handed alpha
Helix 14
AB5
I
185 201Right-handed alpha
Helix 15
AB6
I
202 206Right-handed 310
Helix 16
AB7
I
208 224Right-handed alpha
Helix 17
AB8
I
228 234Right-handed alpha
Helix 18
AB9
I
241 261Right-handed alpha
Helix 19
AC1
I
267 283Right-handed alpha
Helix 20
AC2
J
56 67Right-handed alpha
Helix 21
AC3
J
98 104Right-handed alpha
Helix 22
AC4
J
110 131Right-handed alpha
Helix 23
AC5
J
175 179Right-handed 310
Helix 24
AC6
J
180 185Right-handed alpha
Helix 25
AC7
J
192 209Right-handed alpha
Helix 26
AC8
J
217 230Right-handed alpha
Helix 27
AC9
J
239 243Right-handed 310
Helix 28
AD1
J
256 261Right-handed alpha
Helix 29
AD2
J
265 276Right-handed alpha
Helix 30
AD3
J
285 291Right-handed alpha
Helix 31
AD4
J
292 297Right-handed alpha
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There are 3 sheets in PDB entry 6XBZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
12 21first strand
Strand 2
J
24 31anti-parallel
Strand 3
J
37 43anti-parallel
Strand 4
J
86 92anti-parallel
Strand 5
J
77 83anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
96 97first strand
Strand 2
J
143 145anti-parallel
Strand 3
J
151 153anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
133 135first strand
Strand 2
J
159 161anti-parallel
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