Analysis of interatomic Contacts of Structural Units in PDB entry:
6XIS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XIS entry

There are 4 chains in PDB entry 6XIS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ILE 55SER 381
B
ILE 55SER 381
C
ILE 55SER 381
D
ILE 55SER 381
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 6XIS. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
78 88Right-handed alpha
Helix 2
AA2
A
90 117Right-handed alpha
Helix 3
AA3
A
119 128Right-handed alpha
Helix 4
AA4
A
144 153Right-handed alpha
Helix 5
AA5
A
170 196Right-handed alpha
Helix 6
AA6
A
368 381Right-handed alpha
Helix 7
AA7
B
80 87Right-handed alpha
Helix 8
AA8
B
90 117Right-handed alpha
Helix 9
AA9
B
144 153Right-handed alpha
Helix 10
AB1
B
170 196Right-handed alpha
Helix 11
AB2
B
368 381Right-handed alpha
Helix 12
AB3
C
78 88Right-handed alpha
Helix 13
AB4
C
90 117Right-handed alpha
Helix 14
AB5
C
117 122Right-handed alpha
Helix 15
AB6
C
128 132Right-handed 310
Helix 16
AB7
C
144 153Right-handed alpha
Helix 17
AB8
C
170 196Right-handed alpha
Helix 18
AB9
C
297 302Right-handed alpha
Helix 19
AC1
C
328 332Right-handed 310
Helix 20
AC2
C
353 358Right-handed alpha
Helix 21
AC3
C
368 381Right-handed alpha
Helix 22
AC4
D
80 88Right-handed alpha
Helix 23
AC5
D
90 117Right-handed alpha
Helix 24
AC6
D
144 153Right-handed alpha
Helix 25
AC7
D
170 196Right-handed alpha
Helix 26
AC8
D
328 332Right-handed 310
Helix 27
AC9
D
368 381Right-handed alpha
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There are 23 sheets in PDB entry 6XIS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
205 207first strand
Strand 2
A
219 228anti-parallel
Strand 3
A
212 216anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
205 207first strand
Strand 2
A
219 228anti-parallel
Strand 3
A
279 284anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
258 262first strand
Strand 2
A
234 245anti-parallel
Strand 3
A
273 275anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
258 262first strand
Strand 2
A
234 245anti-parallel
Strand 3
A
305 314anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
336 338first strand
Strand 2
A
359 361anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
342 345first strand
Strand 2
A
348 351anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
205 207first strand
Strand 2
B
219 228anti-parallel
Strand 3
B
279 284anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
205 207first strand
Strand 2
B
219 228anti-parallel
Strand 3
B
212 216anti-parallel
Strand 4
B
333 334parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
254 262first strand
Strand 2
B
237 248anti-parallel
Strand 3
B
305 313anti-parallel
Strand 4
B
320 327anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
336 338first strand
Strand 2
B
359 361anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
342 345first strand
Strand 2
B
348 351anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
205 207first strand
Strand 2
C
219 228anti-parallel
Strand 3
C
212 216anti-parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
205 207first strand
Strand 2
C
219 228anti-parallel
Strand 3
C
279 284anti-parallel
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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
254 262first strand
Strand 2
C
234 248anti-parallel
Strand 3
C
272 275anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
254 262first strand
Strand 2
C
234 248anti-parallel
Strand 3
C
305 314anti-parallel
Strand 4
C
320 327anti-parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
336 338first strand
Strand 2
C
359 361anti-parallel
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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
342 345first strand
Strand 2
C
348 351anti-parallel
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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
205 207first strand
Strand 2
D
219 228anti-parallel
Strand 3
D
279 284anti-parallel
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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
205 207first strand
Strand 2
D
219 228anti-parallel
Strand 3
D
212 216anti-parallel
Strand 4
D
333 334parallel
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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
258 262first strand
Strand 2
D
235 245anti-parallel
Strand 3
D
272 273anti-parallel
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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
258 262first strand
Strand 2
D
235 245anti-parallel
Strand 3
D
305 313anti-parallel
Strand 4
D
321 326anti-parallel
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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
336 338first strand
Strand 2
D
359 361anti-parallel
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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
342 345first strand
Strand 2
D
348 351anti-parallel
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