Analysis of interatomic Contacts of Structural Units in PDB entry:
7A62


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7A62 entry

There are 4 chains in PDB entry 7A62 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 12LYS 401
B
GLY 11GLY 403
C
GLY 11GLY 403
D
GLY 11LYS 401
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are102 helices in PDB entry 7A62. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
12 16Right-handed 310
Helix 2
AA2
A
33 35Right-handed 310
Helix 3
AA3
A
36 45Right-handed alpha
Helix 4
AA4
A
45 52Right-handed alpha
Helix 5
AA5
A
54 61Right-handed alpha
Helix 6
AA6
A
66 70Right-handed 310
Helix 7
AA7
A
72 93Right-handed alpha
Helix 8
AA8
A
104 119Right-handed alpha
Helix 9
AA9
A
125 130Right-handed alpha
Helix 10
AB1
A
144 146Right-handed 310
Helix 11
AB2
A
159 179Right-handed alpha
Helix 12
AB3
A
180 190Right-handed alpha
Helix 13
AB4
A
192 216Right-handed alpha
Helix 14
AB5
A
216 221Right-handed alpha
Helix 15
AB6
A
222 229Right-handed alpha
Helix 16
AB7
A
229 234Right-handed alpha
Helix 17
AB8
A
240 244Right-handed 310
Helix 18
AB9
A
263 267Right-handed 310
Helix 19
AC1
A
268 277Right-handed alpha
Helix 20
AC2
A
286 296Right-handed alpha
Helix 21
AC3
A
297 299Right-handed 310
Helix 22
AC4
A
300 313Right-handed alpha
Helix 23
AC5
A
315 323Right-handed alpha
Helix 24
AC6
A
325 354Right-handed alpha
Helix 25
AC7
A
354 360Right-handed alpha
Helix 26
AC8
A
381 397Right-handed alpha
Helix 27
AC9
B
11 16Right-handed 310
Helix 28
AD1
B
33 35Right-handed 310
Helix 29
AD2
B
36 45Right-handed alpha
Helix 30
AD3
B
45 52Right-handed alpha
Helix 31
AD4
B
54 61Right-handed alpha
Helix 32
AD5
B
66 70Right-handed 310
Helix 33
AD6
B
72 93Right-handed alpha
Helix 34
AD7
B
104 119Right-handed alpha
Helix 35
AD8
B
125 130Right-handed alpha
Helix 36
AD9
B
144 146Right-handed 310
Helix 37
AE1
B
159 179Right-handed alpha
Helix 38
AE2
B
180 190Right-handed alpha
Helix 39
AE3
B
192 215Right-handed alpha
Helix 40
AE4
B
216 221Right-handed alpha
Helix 41
AE5
B
222 229Right-handed alpha
Helix 42
AE6
B
229 234Right-handed alpha
Helix 43
AE7
B
240 244Right-handed 310
Helix 44
AE8
B
263 267Right-handed 310
Helix 45
AE9
B
268 277Right-handed alpha
Helix 46
AF1
B
288 296Right-handed alpha
Helix 47
AF2
B
297 299Right-handed 310
Helix 48
AF3
B
300 313Right-handed alpha
Helix 49
AF4
B
315 323Right-handed alpha
Helix 50
AF5
B
325 354Right-handed alpha
Helix 51
AF6
B
354 360Right-handed alpha
Helix 52
AF7
B
380 397Right-handed alpha
Helix 53
AF8
C
12 16Right-handed 310
Helix 54
AF9
C
33 35Right-handed 310
Helix 55
AG1
C
36 45Right-handed alpha
Helix 56
AG2
C
45 52Right-handed alpha
Helix 57
AG3
C
54 61Right-handed alpha
Helix 58
AG4
C
66 70Right-handed 310
Helix 59
AG5
C
72 93Right-handed alpha
Helix 60
AG6
C
104 119Right-handed alpha
Helix 61
AG7
C
125 130Right-handed alpha
Helix 62
AG8
C
144 146Right-handed 310
Helix 63
AG9
C
159 179Right-handed alpha
Helix 64
AH1
C
180 190Right-handed alpha
Helix 65
AH2
C
192 214Right-handed alpha
Helix 66
AH3
C
216 221Right-handed alpha
Helix 67
AH4
C
222 229Right-handed alpha
Helix 68
AH5
C
229 234Right-handed alpha
Helix 69
AH6
C
240 244Right-handed 310
Helix 70
AH7
C
263 267Right-handed 310
Helix 71
AH8
C
268 277Right-handed alpha
Helix 72
AH9
C
288 297Right-handed alpha
Helix 73
AI1
C
300 313Right-handed alpha
Helix 74
AI2
C
315 323Right-handed alpha
Helix 75
AI3
C
325 354Right-handed alpha
Helix 76
AI4
C
354 360Right-handed alpha
Helix 77
AI5
C
381 398Right-handed alpha
Helix 78
AI6
D
12 16Right-handed 310
Helix 79
AI7
D
33 35Right-handed 310
Helix 80
AI8
D
36 45Right-handed alpha
Helix 81
AI9
D
45 52Right-handed alpha
Helix 82
AJ1
D
54 61Right-handed alpha
Helix 83
AJ2
D
66 70Right-handed 310
Helix 84
AJ3
D
72 93Right-handed alpha
Helix 85
AJ4
D
104 119Right-handed alpha
Helix 86
AJ5
D
125 130Right-handed alpha
Helix 87
AJ6
D
144 146Right-handed 310
Helix 88
AJ7
D
159 179Right-handed alpha
Helix 89
AJ8
D
180 190Right-handed alpha
Helix 90
AJ9
D
192 214Right-handed alpha
Helix 91
AK1
D
216 221Right-handed alpha
Helix 92
AK2
D
222 229Right-handed alpha
Helix 93
AK3
D
229 234Right-handed alpha
Helix 94
AK4
D
240 244Right-handed 310
Helix 95
AK5
D
263 267Right-handed 310
Helix 96
AK6
D
268 277Right-handed alpha
Helix 97
AK7
D
288 297Right-handed alpha
Helix 98
AK8
D
300 313Right-handed alpha
Helix 99
AK9
D
315 323Right-handed alpha
Helix 100
AL1
D
325 354Right-handed alpha
Helix 101
AL2
D
354 360Right-handed alpha
Helix 102
AL3
D
380 397Right-handed alpha
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There are 8 sheets in PDB entry 7A62. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
102 103first strand
Strand 2
A
248 249parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
134 136first strand
Strand 2
A
148 150anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
102 103first strand
Strand 2
B
248 249parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
134 136first strand
Strand 2
B
148 150anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
102 103first strand
Strand 2
C
248 249parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
135 136first strand
Strand 2
C
148 149anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
102 103first strand
Strand 2
D
248 249parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
135 136first strand
Strand 2
D
148 149anti-parallel
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