Analysis of interatomic Contacts of Structural Units in PDB entry:
7BFR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7BFR entry

There are 2 chains in PDB entry 7BFR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 5GLY 125
A
 ALA 127LYS 281
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 7BFR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
59 62Right-handed 310
Helix 2
AA2
A
63 73Right-handed alpha
Helix 3
AA3
A
91 109Right-handed alpha
Helix 4
AA4
A
109 114Right-handed alpha
Helix 5
AA5
A
126 138Right-handed alpha
Helix 6
AA6
A
191 201Right-handed 310
Helix 7
AA7
A
220 234Right-handed alpha
Helix 8
AA8
A
258 275Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 7BFR.

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 23first strand
Strand 2
A
26 33anti-parallel
Strand 3
A
76 80anti-parallel
Strand 4
A
44 50parallel
Strand 5
A
115 125parallel
Strand 6
A
156 160parallel
Strand 7
A
208 213parallel
Strand 8
A
238 243parallel
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