Analysis of interatomic Contacts of Structural Units in PDB entry:
7C17

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7C17 entry

There are 10 chains in PDB entry 7C17 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 6	PRO 322
B	THR 6	VAL 232
C	TYR 3	GLU 1340
D	PHE 17	ARG 1373
E	ALA 2	ALA 77
F	ARG 93	ASP 612
1	A 31	C 88
2	G 2	T 59
G	MET 1	SER 127
H	MET 1	GLY 128

There are139 helices in PDB entry 7C17. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	34	49	Right-handed alpha
Helix 2	AA2	A	77	86	Right-handed alpha
Helix 3	AA3	A	154	161	Right-handed alpha
Helix 4	AA4	A	212	233	Right-handed alpha
Helix 5	AA5	A	257	261	Right-handed 310
Helix 6	AA6	A	263	268	Right-handed alpha
Helix 7	AA7	A	278	283	Right-handed alpha
Helix 8	AA8	A	285	292	Right-handed alpha
Helix 9	AA9	A	297	310	Right-handed alpha
Helix 10	AB1	B	34	49	Right-handed alpha
Helix 11	AB2	B	77	87	Right-handed alpha
Helix 12	AB3	B	212	228	Right-handed alpha
Helix 13	AB4	B	229	232	Right-handed 310
Helix 14	AB5	C	28	40	Right-handed alpha
Helix 15	AB6	C	48	57	Right-handed alpha
Helix 16	AB7	C	81	89	Right-handed alpha
Helix 17	AB8	C	206	211	Right-handed alpha
Helix 18	AB9	C	212	214	Right-handed 310
Helix 19	AC1	C	216	223	Right-handed alpha
Helix 20	AC2	C	270	281	Right-handed alpha
Helix 21	AC3	C	288	293	Right-handed alpha
Helix 22	AC4	C	318	328	Right-handed alpha
Helix 23	AC5	C	345	353	Right-handed alpha
Helix 24	AC6	C	358	371	Right-handed alpha
Helix 25	AC7	C	377	390	Right-handed alpha
Helix 26	AC8	C	400	409	Right-handed alpha
Helix 27	AC9	C	421	437	Right-handed alpha
Helix 28	AD1	C	447	449	Right-handed 310
Helix 29	AD2	C	455	480	Right-handed alpha
Helix 30	AD3	C	488	493	Right-handed alpha
Helix 31	AD4	C	494	509	Right-handed alpha
Helix 32	AD5	C	519	528	Right-handed alpha
Helix 33	AD6	C	551	555	Right-handed 310
Helix 34	AD7	C	662	667	Right-handed alpha
Helix 35	AD8	C	670	674	Right-handed 310
Helix 36	AD9	C	675	688	Right-handed alpha
Helix 37	AE1	C	704	713	Right-handed alpha
Helix 38	AE2	C	820	825	Right-handed alpha
Helix 39	AE3	C	896	906	Right-handed alpha
Helix 40	AE4	C	942	983	Right-handed alpha
Helix 41	AE5	C	993	998	Right-handed 310
Helix 42	AE6	C	1005	1037	Right-handed alpha
Helix 43	AE7	C	1101	1107	Right-handed alpha
Helix 44	AE8	C	1109	1134	Right-handed alpha
Helix 45	AE9	C	1138	1148	Right-handed alpha
Helix 46	AF1	C	1165	1176	Right-handed alpha
Helix 47	AF2	C	1191	1202	Right-handed alpha
Helix 48	AF3	C	1238	1243	Right-handed alpha
Helix 49	AF4	C	1271	1282	Right-handed alpha
Helix 50	AF5	C	1284	1291	Right-handed alpha
Helix 51	AF6	C	1297	1310	Right-handed alpha
Helix 52	AF7	C	1322	1333	Right-handed alpha
Helix 53	AF8	D	26	35	Right-handed alpha
Helix 54	AF9	D	94	100	Right-handed 310
Helix 55	AG1	D	113	117	Right-handed 310
Helix 56	AG2	D	131	140	Right-handed alpha
Helix 57	AG3	D	161	172	Right-handed alpha
Helix 58	AG4	D	181	191	Right-handed alpha
Helix 59	AG5	D	195	208	Right-handed alpha
Helix 60	AG6	D	216	230	Right-handed alpha
Helix 61	AG7	D	263	285	Right-handed alpha
Helix 62	AG8	D	288	308	Right-handed alpha
Helix 63	AG9	D	332	336	Right-handed 310
Helix 64	AH1	D	337	342	Right-handed alpha
Helix 65	AH2	D	369	377	Right-handed alpha
Helix 66	AH3	D	377	388	Right-handed alpha
Helix 67	AH4	D	393	403	Right-handed alpha
Helix 68	AH5	D	405	417	Right-handed alpha
Helix 69	AH6	D	430	432	Right-handed 310
Helix 70	AH7	D	450	452	Right-handed 310
Helix 71	AH8	D	453	458	Right-handed alpha
Helix 72	AH9	D	473	483	Right-handed alpha
Helix 73	AI1	D	503	514	Right-handed alpha
Helix 74	AI2	D	529	539	Right-handed alpha
Helix 75	AI3	D	573	583	Right-handed alpha
Helix 76	AI4	D	597	612	Right-handed alpha
Helix 77	AI5	D	613	634	Right-handed alpha
Helix 78	AI6	D	650	670	Right-handed alpha
Helix 79	AI7	D	674	703	Right-handed alpha
Helix 80	AI8	D	722	728	Right-handed alpha
Helix 81	AI9	D	733	741	Right-handed alpha
Helix 82	AJ1	D	768	801	Right-handed alpha
Helix 83	AJ2	D	868	874	Right-handed alpha
Helix 84	AJ3	D	895	900	Right-handed alpha
Helix 85	AJ4	D	914	924	Right-handed alpha
Helix 86	AJ5	D	925	929	Right-handed 310
Helix 87	AJ6	D	1069	1074	Right-handed alpha
Helix 88	AJ7	D	1138	1147	Right-handed alpha
Helix 89	AJ8	D	1216	1224	Right-handed alpha
Helix 90	AJ9	D	1225	1245	Right-handed alpha
Helix 91	AK1	D	1251	1261	Right-handed alpha
Helix 92	AK2	D	1280	1291	Right-handed alpha
Helix 93	AK3	D	1308	1313	Right-handed alpha
Helix 94	AK4	D	1321	1325	Right-handed 310
Helix 95	AK5	D	1327	1339	Right-handed alpha
Helix 96	AK6	D	1347	1354	Right-handed alpha
Helix 97	AK7	D	1361	1370	Right-handed alpha
Helix 98	AK8	E	6	14	Right-handed alpha
Helix 99	AK9	E	16	32	Right-handed alpha
Helix 100	AL1	E	45	55	Right-handed alpha
Helix 101	AL2	E	60	76	Right-handed alpha
Helix 102	AL3	F	96	108	Right-handed alpha
Helix 103	AL4	F	112	134	Right-handed alpha
Helix 104	AL5	F	135	137	Right-handed 310
Helix 105	AL6	F	138	151	Right-handed alpha
Helix 106	AL7	F	152	154	Right-handed 310
Helix 107	AL8	F	213	220	Right-handed alpha
Helix 108	AL9	F	222	236	Right-handed alpha
Helix 109	AM1	F	242	254	Right-handed alpha
Helix 110	AM2	F	262	292	Right-handed alpha
Helix 111	AM3	F	299	307	Right-handed alpha
Helix 112	AM4	F	313	319	Right-handed alpha
Helix 113	AM5	F	330	352	Right-handed alpha
Helix 114	AM6	F	354	382	Right-handed alpha
Helix 115	AM7	F	383	391	Right-handed alpha
Helix 116	AM8	F	400	418	Right-handed alpha
Helix 117	AM9	F	420	424	Right-handed 310
Helix 118	AN1	F	426	446	Right-handed alpha
Helix 119	AN2	F	453	475	Right-handed alpha
Helix 120	AN3	F	479	487	Right-handed alpha
Helix 121	AN4	F	490	500	Right-handed alpha
Helix 122	AN5	F	530	548	Right-handed alpha
Helix 123	AN6	F	553	564	Right-handed alpha
Helix 124	AN7	F	572	580	Right-handed alpha
Helix 125	AN8	F	583	599	Right-handed alpha
Helix 126	AN9	F	604	609	Right-handed alpha
Helix 127	AO1	F	610	612	Right-handed 310
Helix 128	AO2	G	2	11	Right-handed alpha
Helix 129	AO3	G	13	23	Right-handed alpha
Helix 130	AO4	G	40	57	Right-handed alpha
Helix 131	AO5	G	59	69	Right-handed alpha
Helix 132	AO6	G	78	106	Right-handed alpha
Helix 133	AO7	G	122	127	Right-handed alpha
Helix 134	AO8	H	4	11	Right-handed alpha
Helix 135	AO9	H	13	23	Right-handed alpha
Helix 136	AP1	H	40	55	Right-handed alpha
Helix 137	AP2	H	59	71	Right-handed alpha
Helix 138	AP3	H	78	108	Right-handed alpha
Helix 139	AP4	H	121	128	Right-handed alpha

There are 40 sheets in PDB entry 7C17. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	12	17	first strand
Strand 2	A	23	31	anti-parallel
Strand 3	A	199	207	anti-parallel
Strand 4	A	180	189	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	115	116	first strand
Strand 2	A	97	104	anti-parallel
Strand 3	A	140	149	anti-parallel
Strand 4	A	53	61	anti-parallel
Strand 5	A	170	172	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	108	110	first strand
Strand 2	A	131	133	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	17	18	first strand
Strand 2	B	24	28	anti-parallel
Strand 3	B	200	205	anti-parallel
Strand 4	B	183	188	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	115	116	first strand
Strand 2	B	98	104	anti-parallel
Strand 3	B	140	150	anti-parallel
Strand 4	B	52	60	anti-parallel
Strand 5	B	170	172	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	109	110	first strand
Strand 2	B	131	132	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	59	60	first strand
Strand 2	C	66	70	anti-parallel
Strand 3	C	96	104	anti-parallel
Strand 4	C	74	75	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	59	60	first strand
Strand 2	C	66	70	anti-parallel
Strand 3	C	96	104	anti-parallel
Strand 4	C	118	123	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	136	138	first strand
Strand 2	C	141	145	anti-parallel
Strand 3	C	512	514	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	451	454	first strand
Strand 2	C	147	151	anti-parallel
Strand 3	C	529	531	parallel
Strand 4	C	573	575	anti-parallel
Strand 5	C	558	559	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	154	157	first strand
Strand 2	C	174	177	anti-parallel
Strand 3	C	184	187	anti-parallel
Strand 4	C	195	198	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	236	240	first strand
Strand 2	C	227	233	anti-parallel
Strand 3	C	333	336	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	250	251	first strand
Strand 2	C	267	268	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	580	581	first strand
Strand 2	C	587	593	anti-parallel
Strand 3	C	604	607	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	580	581	first strand
Strand 2	C	587	593	anti-parallel
Strand 3	C	652	654	anti-parallel
Strand 4	C	615	617	parallel
Strand 5	C	634	638	anti-parallel
Strand 6	C	641	645	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	689	690	first strand
Strand 2	C	1233	1235	anti-parallel
Strand 3	C	1066	1067	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	700	701	first strand
Strand 2	C	1182	1183	parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	748	752	first strand
Strand 2	C	731	736	anti-parallel
Strand 3	C	722	727	anti-parallel
Strand 4	C	776	777	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	757	758	first strand
Strand 2	C	764	765	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	768	769	first strand
Strand 2	C	784	785	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	789	790	first strand
Strand 2	C	793	794	anti-parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1076	1079	first strand
Strand 2	C	816	818	parallel
Strand 3	C	1096	1098	anti-parallel
Strand 4	C	801	804	parallel
Strand 5	C	1225	1229	anti-parallel
Strand 6	C	1209	1210	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	830	833	first strand
Strand 2	C	1046	1058	anti-parallel
Strand 3	C	836	841	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	830	833	first strand
Strand 2	C	1046	1058	anti-parallel
Strand 3	C	927	935	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	888	889	first strand
Strand 2	C	913	914	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1269	1270	first strand
Strand 2	D	345	346	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1335	1339	first strand
Strand 2	D	20	24	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	158	160	first strand
Strand 2	D	144	148	anti-parallel
Strand 3	D	177	179	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	253	254	first strand
Strand 2	D	260	261	anti-parallel

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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	350	353	first strand
Strand 2	D	466	469	anti-parallel
Strand 3	D	421	425	anti-parallel
Strand 4	D	434	439	anti-parallel
Strand 5	D	365	366	parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	355	357	first strand
Strand 2	D	447	449	parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	548	556	first strand
Strand 2	D	564	572	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	820	822	first strand
Strand 2	D	880	883	anti-parallel
Strand 3	D	843	844	anti-parallel

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There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	949	951	first strand
Strand 2	D	1016	1019	anti-parallel
Strand 3	D	1002	1003	anti-parallel
Strand 4	D	973	975	anti-parallel
Strand 5	D	965	967	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	991	994	first strand
Strand 2	D	983	985	anti-parallel
Strand 3	D	956	959	anti-parallel
Strand 4	D	1010	1011	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1024	1026	first strand
Strand 2	D	1123	1125	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1077	1078	first strand
Strand 2	D	1099	1100	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1187	1188	first strand
Strand 2	D	1175	1178	anti-parallel
Strand 3	D	1162	1164	anti-parallel
Strand 4	D	1202	1203	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1277	1279	first strand
Strand 2	D	1263	1266	anti-parallel
Strand 3	D	1302	1304	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	30	31	first strand
Strand 2	H	37	38	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7C17

Analysis of interatomic Contacts of Structural Units in PDB entry:
7C17