Analysis of interatomic Contacts of Structural Units in PDB entry:
7RDB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7RDB entry

There are 11 chains in PDB entry 7RDB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 THR 115GLN 236
A
 THR 115GLN 236
C
 THR 115GLN 236
D
 THR 115PHE 235
E
 THR 115GLN 236
F
 THR 115GLN 236
G
 THR 115GLN 236
H
 THR 115GLN 236
I
 THR 115GLN 236
J
 PHE 116GLN 236
K
 THR 115GLN 167
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are159 helices in PDB entry 7RDB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
116 134Right-handed alpha
Helix 2
AA2
B
138 152Right-handed alpha
Helix 3
AA3
B
159 166Right-handed 310
Helix 4
AA4
B
182 186Right-handed 310
Helix 5
AA5
B
206 211Right-handed alpha
Helix 6
AA6
B
218 230Right-handed alpha
Helix 7
AA7
B
230 235Right-handed alpha
Helix 8
AA8
A
116 134Right-handed alpha
Helix 9
AA9
A
138 153Right-handed alpha
Helix 10
AB1
A
159 166Right-handed 310
Helix 11
AB2
A
182 186Right-handed 310
Helix 12
AB3
A
206 211Right-handed alpha
Helix 13
AB4
A
218 230Right-handed alpha
Helix 14
AB5
A
231 235Right-handed 310
Helix 15
AB6
C
116 135Right-handed alpha
Helix 16
AB7
C
138 153Right-handed alpha
Helix 17
AB8
C
159 166Right-handed 310
Helix 18
AB9
C
182 186Right-handed 310
Helix 19
AC1
C
206 211Right-handed alpha
Helix 20
AC2
C
218 230Right-handed alpha
Helix 21
AC3
C
230 235Right-handed alpha
Helix 22
AC4
D
116 134Right-handed alpha
Helix 23
AC5
D
138 153Right-handed alpha
Helix 24
AC6
D
159 166Right-handed 310
Helix 25
AC7
D
182 186Right-handed 310
Helix 26
AC8
D
206 211Right-handed alpha
Helix 27
AC9
D
218 230Right-handed alpha
Helix 28
AD1
D
230 235Right-handed alpha
Helix 29
AD2
E
116 134Right-handed alpha
Helix 30
AD3
E
138 153Right-handed alpha
Helix 31
AD4
E
159 166Right-handed 310
Helix 32
AD5
E
182 186Right-handed 310
Helix 33
AD6
E
206 210Right-handed 310
Helix 34
AD7
E
218 230Right-handed alpha
Helix 35
AD8
E
230 235Right-handed alpha
Helix 36
AD9
F
116 134Right-handed alpha
Helix 37
AE1
F
138 153Right-handed alpha
Helix 38
AE2
F
159 166Right-handed 310
Helix 39
AE3
F
182 186Right-handed 310
Helix 40
AE4
F
206 211Right-handed alpha
Helix 41
AE5
F
218 230Right-handed alpha
Helix 42
AE6
F
230 236Right-handed alpha
Helix 43
AE7
G
116 134Right-handed alpha
Helix 44
AE8
G
138 152Right-handed alpha
Helix 45
AE9
G
159 166Right-handed 310
Helix 46
AF1
G
182 186Right-handed 310
Helix 47
AF2
G
218 230Right-handed alpha
Helix 48
AF3
H
117 134Right-handed alpha
Helix 49
AF4
H
138 152Right-handed alpha
Helix 50
AF5
H
159 166Right-handed 310
Helix 51
AF6
H
182 186Right-handed 310
Helix 52
AF7
H
206 211Right-handed alpha
Helix 53
AF8
H
218 230Right-handed alpha
Helix 54
AF9
H
230 236Right-handed alpha
Helix 55
AG1
I
116 134Right-handed alpha
Helix 56
AG2
I
138 152Right-handed alpha
Helix 57
AG3
I
159 166Right-handed 310
Helix 58
AG4
I
182 186Right-handed 310
Helix 59
AG5
I
218 230Right-handed alpha
Helix 60
AG6
I
230 236Right-handed alpha
Helix 61
AG7
J
117 134Right-handed alpha
Helix 62
AG8
J
138 152Right-handed alpha
Helix 63
AG9
J
159 166Right-handed 310
Helix 64
AH1
J
182 186Right-handed 310
Helix 65
AH2
J
218 230Right-handed alpha
Helix 66
AH3
J
230 236Right-handed alpha
Helix 67
AH4
K
116 134Right-handed alpha
Helix 68
AH5
K
138 152Right-handed alpha
Helix 69
AH6
K
159 166Right-handed 310
Helix 70
AH7
K
182 186Right-handed 310
Helix 71
AH8
K
206 212Right-handed alpha
Helix 72
AH9
K
218 230Right-handed alpha
Helix 73
AI1
K
231 235Right-handed 310
Helix 74
AI2
L
117 134Right-handed alpha
Helix 75
AI3
L
138 152Right-handed alpha
Helix 76
AI4
L
159 166Right-handed 310
Helix 77
AI5
L
182 186Right-handed 310
Helix 78
AI6
L
218 230Right-handed alpha
Helix 79
AI7
L
230 236Right-handed alpha
Helix 80
AI8
M
116 134Right-handed alpha
Helix 81
AI9
M
138 153Right-handed alpha
Helix 82
AJ1
M
159 166Right-handed 310
Helix 83
AJ2
M
182 186Right-handed 310
Helix 84
AJ3
M
218 231Right-handed alpha
Helix 85
AJ4
M
232 235Right-handed 310
Helix 86
AJ5
N
116 134Right-handed alpha
Helix 87
AJ6
N
138 152Right-handed alpha
Helix 88
AJ7
N
159 166Right-handed 310
Helix 89
AJ8
N
182 186Right-handed 310
Helix 90
AJ9
N
209 213Right-handed 310
Helix 91
AK1
N
218 230Right-handed alpha
Helix 92
AK2
N
232 236Right-handed 310
Helix 93
AK3
O
117 134Right-handed alpha
Helix 94
AK4
O
138 153Right-handed alpha
Helix 95
AK5
O
159 166Right-handed 310
Helix 96
AK6
O
182 186Right-handed 310
Helix 97
AK7
O
195 200Right-handed 310
Helix 98
AK8
O
206 211Right-handed alpha
Helix 99
AK9
O
218 236Right-handed alpha
Helix 100
AL1
P
116 134Right-handed alpha
Helix 101
AL2
P
138 152Right-handed alpha
Helix 102
AL3
P
159 166Right-handed 310
Helix 103
AL4
P
182 186Right-handed 310
Helix 104
AL5
P
218 230Right-handed alpha
Helix 105
AL6
P
231 235Right-handed 310
Helix 106
AL7
Q
116 134Right-handed alpha
Helix 107
AL8
Q
138 153Right-handed alpha
Helix 108
AL9
Q
159 166Right-handed 310
Helix 109
AM1
Q
182 186Right-handed 310
Helix 110
AM2
Q
218 230Right-handed alpha
Helix 111
AM3
Q
230 235Right-handed alpha
Helix 112
AM4
R
116 134Right-handed alpha
Helix 113
AM5
R
135 137Right-handed 310
Helix 114
AM6
R
138 153Right-handed alpha
Helix 115
AM7
R
159 166Right-handed 310
Helix 116
AM8
R
182 186Right-handed 310
Helix 117
AM9
R
205 211Right-handed alpha
Helix 118
AN1
R
218 230Right-handed alpha
Helix 119
AN2
R
230 236Right-handed alpha
Helix 120
AN3
S
116 134Right-handed alpha
Helix 121
AN4
S
138 152Right-handed alpha
Helix 122
AN5
S
159 170Right-handed 310
Helix 123
AN6
S
182 186Right-handed 310
Helix 124
AN7
S
209 213Right-handed 310
Helix 125
AN8
S
218 230Right-handed alpha
Helix 126
AN9
S
230 236Right-handed alpha
Helix 127
AO1
T
117 134Right-handed alpha
Helix 128
AO2
T
138 152Right-handed alpha
Helix 129
AO3
T
159 170Right-handed 310
Helix 130
AO4
T
182 186Right-handed 310
Helix 131
AO5
T
206 211Right-handed alpha
Helix 132
AO6
T
218 230Right-handed alpha
Helix 133
AO7
T
230 235Right-handed alpha
Helix 134
AO8
U
117 134Right-handed alpha
Helix 135
AO9
U
138 152Right-handed alpha
Helix 136
AP1
U
159 170Right-handed 310
Helix 137
AP2
U
182 186Right-handed 310
Helix 138
AP3
U
206 211Right-handed alpha
Helix 139
AP4
U
218 230Right-handed alpha
Helix 140
AP5
U
231 234Right-handed 310
Helix 141
AP6
V
118 134Right-handed alpha
Helix 142
AP7
V
138 152Right-handed alpha
Helix 143
AP8
V
159 170Right-handed 310
Helix 144
AP9
V
182 186Right-handed 310
Helix 145
AQ1
V
218 230Right-handed alpha
Helix 146
AQ2
V
230 235Right-handed alpha
Helix 147
AQ3
W
116 134Right-handed alpha
Helix 148
AQ4
W
138 153Right-handed alpha
Helix 149
AQ5
W
159 165Right-handed 310
Helix 150
AQ6
W
182 186Right-handed 310
Helix 151
AQ7
W
206 211Right-handed alpha
Helix 152
AQ8
W
218 230Right-handed alpha
Helix 153
AQ9
W
230 235Right-handed alpha
Helix 154
AR1
X
116 134Right-handed alpha
Helix 155
AR2
X
138 153Right-handed alpha
Helix 156
AR3
X
159 166Right-handed 310
Helix 157
AR4
X
182 186Right-handed 310
Helix 158
AR5
X
218 230Right-handed alpha
Helix 159
AR6
X
230 235Right-handed alpha
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