Analysis of interatomic Contacts of Structural Units in PDB entry:
7S0K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7S0K entry

There is 1 chain in PDB entry 7S0K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 37ASN 560
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 7S0K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
174 178Right-handed 310
Helix 2
AA2
A
198 202Right-handed 310
Helix 3
AA3
A
329 336Right-handed alpha
Helix 4
AA4
A
339 344Right-handed alpha
Helix 5
AA5
A
352 354Right-handed 310
Helix 6
AA6
A
367 373Right-handed alpha
Helix 7
AA7
A
376 380Right-handed 310
Helix 8
AA8
A
389 402Right-handed alpha
Helix 9
AA9
A
410 414Right-handed 310
Helix 10
AB1
A
447 450Right-handed alpha
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There are 9 sheets in PDB entry 7S0K. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 42first strand
Strand 2
A
56 65anti-parallel
Strand 3
A
438 446anti-parallel
Strand 4
A
296 301anti-parallel
Strand 5
A
288 291anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 82first strand
Strand 2
A
106 113anti-parallel
Strand 3
A
244 251anti-parallel
Strand 4
A
276 282anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 92first strand
Strand 2
A
99 103anti-parallel
Strand 3
A
451 455anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
239 241first strand
Strand 2
A
117 120anti-parallel
Strand 3
A
429 432anti-parallel
Strand 4
A
416 417anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 129first strand
Strand 2
A
228 235anti-parallel
Strand 3
A
316 324anti-parallel
Strand 4
A
347 350anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 137first strand
Strand 2
A
218 225anti-parallel
Strand 3
A
185 188anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 140first strand
Strand 2
A
143 144anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
459 461first strand
Strand 2
A
480 486anti-parallel
Strand 3
A
521 526anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
512 516first strand
Strand 2
A
494 502anti-parallel
Strand 3
A
538 545anti-parallel
Strand 4
A
551 559anti-parallel
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