Analysis of interatomic Contacts of Structural Units in PDB entry:
7SHE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7SHE entry

There are 2 chains in PDB entry 7SHE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 66SER 670
B
 ASP 66SER 670
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 7SHE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
66 76Right-handed alpha
Helix 2
AA2
A
81 87Right-handed alpha
Helix 3
AA3
A
88 93Right-handed 310
Helix 4
AA4
A
120 137Right-handed alpha
Helix 5
AA5
A
150 167Right-handed alpha
Helix 6
AA6
A
333 337Right-handed 310
Helix 7
AA7
A
405 409Right-handed 310
Helix 8
AA8
A
413 441Right-handed alpha
Helix 9
AA9
A
444 449Right-handed alpha
Helix 10
AB1
A
451 465Right-handed alpha
Helix 11
AB2
A
469 474Right-handed alpha
Helix 12
AB3
A
479 496Right-handed alpha
Helix 13
AB4
A
498 514Right-handed alpha
Helix 14
AB5
A
529 549Right-handed alpha
Helix 15
AB6
A
580 582Right-handed 310
Helix 16
AB7
A
583 600Right-handed alpha
Helix 17
AB8
A
608 634Right-handed alpha
Helix 18
AB9
A
640 651Right-handed alpha
Helix 19
AC1
A
654 662Right-handed alpha
Helix 20
AC2
A
663 668Right-handed alpha
Helix 21
AC3
B
67 78Right-handed alpha
Helix 22
AC4
B
81 87Right-handed alpha
Helix 23
AC5
B
89 93Right-handed 310
Helix 24
AC6
B
120 139Right-handed alpha
Helix 25
AC7
B
150 164Right-handed alpha
Helix 26
AC8
B
350 354Right-handed 310
Helix 27
AC9
B
413 418Right-handed alpha
Helix 28
AD1
B
420 425Right-handed alpha
Helix 29
AD2
B
425 441Right-handed alpha
Helix 30
AD3
B
446 451Right-handed alpha
Helix 31
AD4
B
452 461Right-handed alpha
Helix 32
AD5
B
463 467Right-handed 310
Helix 33
AD6
B
469 475Right-handed alpha
Helix 34
AD7
B
478 514Right-handed alpha
Helix 35
AD8
B
526 549Right-handed alpha
Helix 36
AD9
B
550 554Right-handed 310
Helix 37
AE1
B
584 600Right-handed alpha
Helix 38
AE2
B
608 634Right-handed alpha
Helix 39
AE3
B
646 651Right-handed alpha
Helix 40
AE4
B
663 668Right-handed alpha
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There are 5 sheets in PDB entry 7SHE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 176first strand
Strand 2
A
303 309anti-parallel
Strand 3
A
281 288anti-parallel
Strand 4
A
268 270anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
190 192first strand
Strand 2
A
202 204anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
559 563first strand
Strand 2
A
569 573anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
202 203first strand
Strand 2
B
191 192anti-parallel
Strand 3
B
174 176anti-parallel
Strand 4
B
302 306anti-parallel
Strand 5
B
286 289anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
560 561first strand
Strand 2
B
571 572anti-parallel
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