Analysis of Ligand-Protein Contacts in PDB entry:
1M54


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 1M54. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
PLP
A
1110 15PYRIDOXAL-5'-PHOSPHATE
lig 2
HEM
A
1120 43PROTOPORPHYRIN IX CONTAINING FE
lig 3
PLP
B
1210 15PYRIDOXAL-5'-PHOSPHATE
lig 4
HEM
B
1220 43PROTOPORPHYRIN IX CONTAINING FE
lig 5
PLP
C
1310 15PYRIDOXAL-5'-PHOSPHATE
lig 6
HEM
C
1320 43PROTOPORPHYRIN IX CONTAINING FE
lig 7
PLP
D
1410 15PYRIDOXAL-5'-PHOSPHATE
lig 8
HEM
D
1420 43PROTOPORPHYRIN IX CONTAINING FE
lig 9
PLP
E
1510 15PYRIDOXAL-5'-PHOSPHATE
lig 10
HEM
E
1520 43PROTOPORPHYRIN IX CONTAINING FE
lig 11
PLP
F
1610 15PYRIDOXAL-5'-PHOSPHATE
lig 12
HEM
F
1620 43PROTOPORPHYRIN IX CONTAINING FE