Analysis of Ligand-Protein Contacts in PDB entry:
1RFU


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 24 ligands in PDB entry 1RFU. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ZN
A
403 1ZINC ION
lig 2
PLP
A
401 15PYRIDOXAL-5'-PHOSPHATE
lig 3
ADP
A
402 27ADENOSINE-5'-DIPHOSPHATE
lig 4
ZN
B
1403 1ZINC ION
lig 5
PLP
B
1401 15PYRIDOXAL-5'-PHOSPHATE
lig 6
ADP
B
1402 27ADENOSINE-5'-DIPHOSPHATE
lig 7
ZN
C
2403 1ZINC ION
lig 8
PLP
C
2401 15PYRIDOXAL-5'-PHOSPHATE
lig 9
ADP
C
2402 27ADENOSINE-5'-DIPHOSPHATE
lig 10
ZN
D
3403 1ZINC ION
lig 11
PLP
D
3401 15PYRIDOXAL-5'-PHOSPHATE
lig 12
ADP
D
3402 27ADENOSINE-5'-DIPHOSPHATE
lig 13
ZN
E
4403 1ZINC ION
lig 14
PLP
E
4401 15PYRIDOXAL-5'-PHOSPHATE
lig 15
ADP
E
4402 27ADENOSINE-5'-DIPHOSPHATE
lig 16
ZN
F
5403 1ZINC ION
lig 17
PLP
F
5401 15PYRIDOXAL-5'-PHOSPHATE
lig 18
ADP
F
5402 27ADENOSINE-5'-DIPHOSPHATE
lig 19
ZN
G
6403 1ZINC ION
lig 20
PLP
G
6401 15PYRIDOXAL-5'-PHOSPHATE
lig 21
ADP
G
6402 27ADENOSINE-5'-DIPHOSPHATE
lig 22
ZN
H
7403 1ZINC ION
lig 23
PLP
H
7401 15PYRIDOXAL-5'-PHOSPHATE
lig 24
ADP
H
7402 27ADENOSINE-5'-DIPHOSPHATE