Analysis of Ligand-Protein Contacts in PDB entry:
1TYE


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 44 ligands in PDB entry 1TYE. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
MAN
G
3 11ALPHA-D-MANNOPYRANOSE
lig 4
BMA
G
4 11BETA-D-MANNOPYRANOSE
lig 5
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
MAN
H
3 11ALPHA-D-MANNOPYRANOSE
lig 8
BMA
H
4 11BETA-D-MANNOPYRANOSE
lig 9
MAN
H
5 11ALPHA-D-MANNOPYRANOSE
lig 10
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
MAN
I
3 11ALPHA-D-MANNOPYRANOSE
lig 13
BMA
I
4 11BETA-D-MANNOPYRANOSE
lig 14
CA
A
1404 1CALCIUM ION
lig 15
CA
A
1405 1CALCIUM ION
lig 16
CA
A
1406 1CALCIUM ION
lig 17
CA
A
1407 1CALCIUM ION
lig 18
NAG
B
1001 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
B
1006 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
CAC
B
1301 5CACODYLATE ION
lig 21
MG
B
1401 1MAGNESIUM ION
lig 22
CA
B
1402 1CALCIUM ION
lig 23
CA
B
1403 1CALCIUM ION
lig 24
CA
C
1411 1CALCIUM ION
lig 25
CA
C
1412 1CALCIUM ION
lig 26
CA
C
1413 1CALCIUM ION
lig 27
CA
C
1414 1CALCIUM ION
lig 28
NAG
D
1007 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
NAG
D
1013 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
CAC
D
1302 5CACODYLATE ION
lig 31
MG
D
1408 1MAGNESIUM ION
lig 32
CA
D
1409 1CALCIUM ION
lig 33
CA
D
1410 1CALCIUM ION
lig 34
NAG
E
1014 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
CA
E
1418 1CALCIUM ION
lig 36
CA
E
1419 1CALCIUM ION
lig 37
CA
E
1420 1CALCIUM ION
lig 38
CA
E
1421 1CALCIUM ION
lig 39
NAG
F
1015 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 40
NAG
F
1020 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
CAC
F
1303 5CACODYLATE ION
lig 42
MG
F
1415 1MAGNESIUM ION
lig 43
CA
F
1416 1CALCIUM ION
lig 44
CA
F
1417 1CALCIUM ION