Analysis of Ligand-Protein Contacts in PDB entry:
1D2V


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 39 ligands in PDB entry 1D2V. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CSO
C
150 7S-HYDROXYCYSTEINE
lig 2
CSO
D
150 7S-HYDROXYCYSTEINE
lig 3
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 6
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
E
5 11ALPHA-D-MANNOPYRANOSE
lig 8
FUC
E
6 10ALPHA-L-FUCOPYRANOSE
lig 9
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 12
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 14
FUC
F
6 10ALPHA-L-FUCOPYRANOSE
lig 15
CA
A
600 1CALCIUM ION
lig 16
BR
A
601 1BROMIDE ION
lig 17
BR
A
758 1BROMIDE ION
lig 18
BR
A
843 1BROMIDE ION
lig 19
BR
A
889 1BROMIDE ION
lig 20
SO4
A
1602 5SULFATE ION
lig 21
HEM
A
605 43PROTOPORPHYRIN IX CONTAINING FE
lig 22
NAG
C
1620 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
NAG
C
1630 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
SO4
C
1603 5SULFATE ION
lig 25
ACT
C
1606 4ACETATE ION
lig 26
ACT
C
1604 4ACETATE ION
lig 27
ACT
C
1607 4ACETATE ION
lig 28
CA
B
600 1CALCIUM ION
lig 29
BR
B
601 1BROMIDE ION
lig 30
BR
B
758 1BROMIDE ION
lig 31
BR
B
843 1BROMIDE ION
lig 32
BR
B
889 1BROMIDE ION
lig 33
SO4
B
2602 5SULFATE ION
lig 34
HEM
B
605 43PROTOPORPHYRIN IX CONTAINING FE
lig 35
NAG
D
2620 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
NAG
D
2630 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
ACT
D
2606 4ACETATE ION
lig 38
ACT
D
2604 4ACETATE ION
lig 39
ACT
D
2607 4ACETATE ION