Analysis of Ligand-Protein Contacts in PDB entry:
1D5L


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 38 ligands in PDB entry 1D5L. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CSO
C
150 7S-HYDROXYCYSTEINE
lig 2
CSO
D
150 7S-HYDROXYCYSTEINE
lig 3
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 6
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
E
5 11ALPHA-D-MANNOPYRANOSE
lig 8
FUC
E
6 10ALPHA-L-FUCOPYRANOSE
lig 9
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 12
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 14
FUC
F
6 10ALPHA-L-FUCOPYRANOSE
lig 15
CL
A
1601 1CHLORIDE ION
lig 16
SO4
A
1602 5SULFATE ION
lig 17
CYN
A
1844 2CYANIDE ION
lig 18
HEM
A
605 43PROTOPORPHYRIN IX CONTAINING FE
lig 19
NAG
C
1620 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
C
1630 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
CA
C
1600 1CALCIUM ION
lig 22
SO4
C
1603 5SULFATE ION
lig 23
ACT
C
1606 4ACETATE ION
lig 24
ACT
C
1604 4ACETATE ION
lig 25
ACT
C
1607 4ACETATE ION
lig 26
ACT
C
1612 4ACETATE ION
lig 27
CYN
C
1889 2CYANIDE ION
lig 28
CL
B
2601 1CHLORIDE ION
lig 29
CYN
B
2844 2CYANIDE ION
lig 30
HEM
B
605 43PROTOPORPHYRIN IX CONTAINING FE
lig 31
NAG
D
2620 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
NAG
D
2630 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
CA
D
2600 1CALCIUM ION
lig 34
SO4
D
2602 5SULFATE ION
lig 35
ACT
D
2606 4ACETATE ION
lig 36
ACT
D
2604 4ACETATE ION
lig 37
ACT
D
2607 4ACETATE ION
lig 38
CYN
D
2889 2CYANIDE ION