Analysis of Ligand-Protein Contacts in PDB entry:
1DNW


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 39 ligands in PDB entry 1DNW. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CSO
C
150 7S-HYDROXYCYSTEINE
lig 2
CSO
D
150 7S-HYDROXYCYSTEINE
lig 3
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 6
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
E
5 11ALPHA-D-MANNOPYRANOSE
lig 8
FUC
E
6 10ALPHA-L-FUCOPYRANOSE
lig 9
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 12
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 14
FUC
F
6 10ALPHA-L-FUCOPYRANOSE
lig 15
SCN
A
105 3THIOCYANATE ION
lig 16
SO4
A
106 5SULFATE ION
lig 17
CYN
A
107 2CYANIDE ION
lig 18
NAG
C
620 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
C
630 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
CA
C
1 1CALCIUM ION
lig 21
SO4
C
13 5SULFATE ION
lig 22
SCN
C
9 3THIOCYANATE ION
lig 23
CYN
C
6 2CYANIDE ION
lig 24
HEM
C
14 43PROTOPORPHYRIN IX CONTAINING FE
lig 25
ACY
C
19 4ACETIC ACID
lig 26
ACY
C
21 4ACETIC ACID
lig 27
ACY
C
20 4ACETIC ACID
lig 28
SCN
B
105 3THIOCYANATE ION
lig 29
SO4
B
106 5SULFATE ION
lig 30
SCN
B
107 3THIOCYANATE ION
lig 31
CYN
B
108 2CYANIDE ION
lig 32
HEM
B
109 43PROTOPORPHYRIN IX CONTAINING FE
lig 33
NAG
D
620 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
NAG
D
630 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
CA
D
2 1CALCIUM ION
lig 36
CYN
D
5 2CYANIDE ION
lig 37
ACY
D
18 4ACETIC ACID
lig 38
ACY
D
17 4ACETIC ACID
lig 39
ACY
D
16 4ACETIC ACID