Analysis of Ligand-Protein Contacts in PDB entry:
1DVA


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 1DVA. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ACE
X
0 3ACETYL GROUP
lig 2
ACE
Y
0 3ACETYL GROUP
lig 3
BGC
A
1 11BETA-D-GLUCOPYRANOSE
lig 4
GAL
A
2 11BETA-D-GALACTOPYRANOSE
lig 5
0Z6
H
1 34 PHENYLALANINAMIDE
lig 6
CA
H
300 1CALCIUM ION
lig 7
CAC
H
310 5CACODYLATE ION
lig 8
FUC
L
504 10ALPHA-L-FUCOPYRANOSE
lig 9
FUC
L
506 10ALPHA-L-FUCOPYRANOSE
lig 10
CA
L
302 1CALCIUM ION
lig 11
0Z6
I
1 34 PHENYLALANINAMIDE
lig 12
CA
I
301 1CALCIUM ION
lig 13
CAC
I
311 5CACODYLATE ION
lig 14
GLC
M
503 11ALPHA-D-GLUCOPYRANOSE
lig 15
FUL
M
505 10BETA-L-FUCOPYRANOSE
lig 16
CA
M
303 1CALCIUM ION