Analysis of Ligand-Protein Contacts in PDB entry:
1DXR


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 25 ligands in PDB entry 1DXR. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
FME
H
1 10N-FORMYLMETHIONINE
lig 2
HEC
C
401 43HEME C
lig 3
HEC
C
402 43HEME C
lig 4
HEC
C
403 43HEME C
lig 5
HEC
C
404 43HEME C
lig 6
LDA
H
1259 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 7
LDA
H
1260 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 8
SO4
H
1261 5SULFATE ION
lig 9
BCB
L
400 66BACTERIOCHLOROPHYLL B
lig 10
BCB
L
401 66BACTERIOCHLOROPHYLL B
lig 11
BPB
L
402 65BACTERIOPHEOPHYTIN B
lig 12
FE2
L
500 1FE (II) ION
lig 13
MQ9
L
501 58MENAQUINONE-9
lig 14
MST
L
502 162-T-BUTYLAMINO-4-ETHYLAMINO-6-METHYLTHIO-S
lig 15
LDA
L
1274 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 16
BCB
M
400 66BACTERIOCHLOROPHYLL B
lig 17
BCB
M
401 66BACTERIOCHLOROPHYLL B
lig 18
BPB
M
402 65BACTERIOPHEOPHYTIN B
lig 19
NS5
M
600 4015-CIS-1,2-DIHYDRONEUROSPORENE
lig 20
LDA
M
1324 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 21
LDA
M
1325 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 22
LDA
M
1326 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 23
SO4
M
1327 5SULFATE ION
lig 24
SO4
M
1328 5SULFATE ION
lig 25
SO4
M
1329 5SULFATE ION