Analysis of Ligand-Protein Contacts in PDB entry:
1F52


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 60 ligands in PDB entry 1F52. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
MN
A
469 1MANGANESE (II) ION
lig 2
MN
A
470 1MANGANESE (II) ION
lig 3
ADP
A
4471 27ADENOSINE-5'-DIPHOSPHATE
lig 4
MPD
A
5472 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 5
MPD
A
5481 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 6
MN
B
469 1MANGANESE (II) ION
lig 7
MN
B
470 1MANGANESE (II) ION
lig 8
ADP
B
4472 27ADENOSINE-5'-DIPHOSPHATE
lig 9
MPD
B
5471 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 10
MPD
B
5474 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 11
MN
C
469 1MANGANESE (II) ION
lig 12
MN
C
470 1MANGANESE (II) ION
lig 13
ADP
C
4473 27ADENOSINE-5'-DIPHOSPHATE
lig 14
MPD
C
5473 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 15
MPD
C
5476 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 16
MN
D
469 1MANGANESE (II) ION
lig 17
MN
D
470 1MANGANESE (II) ION
lig 18
ADP
D
4474 27ADENOSINE-5'-DIPHOSPHATE
lig 19
MPD
D
5475 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 20
MPD
D
5478 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 21
MN
E
469 1MANGANESE (II) ION
lig 22
MN
E
470 1MANGANESE (II) ION
lig 23
ADP
E
4475 27ADENOSINE-5'-DIPHOSPHATE
lig 24
MPD
E
5477 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 25
MPD
E
5480 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 26
MN
F
469 1MANGANESE (II) ION
lig 27
MN
F
470 1MANGANESE (II) ION
lig 28
ADP
F
4476 27ADENOSINE-5'-DIPHOSPHATE
lig 29
MPD
F
5479 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 30
MPD
F
5482 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 31
MN
G
469 1MANGANESE (II) ION
lig 32
MN
G
470 1MANGANESE (II) ION
lig 33
ADP
G
4477 27ADENOSINE-5'-DIPHOSPHATE
lig 34
MPD
G
5484 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 35
MPD
G
5485 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 36
MN
H
469 1MANGANESE (II) ION
lig 37
MN
H
470 1MANGANESE (II) ION
lig 38
ADP
H
4478 27ADENOSINE-5'-DIPHOSPHATE
lig 39
MPD
H
5486 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 40
MPD
H
5487 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 41
MN
I
469 1MANGANESE (II) ION
lig 42
MN
I
470 1MANGANESE (II) ION
lig 43
ADP
I
4479 27ADENOSINE-5'-DIPHOSPHATE
lig 44
MPD
I
5488 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 45
MPD
I
5489 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 46
MN
J
469 1MANGANESE (II) ION
lig 47
MN
J
470 1MANGANESE (II) ION
lig 48
ADP
J
4480 27ADENOSINE-5'-DIPHOSPHATE
lig 49
MPD
J
5490 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 50
MPD
J
5491 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 51
MN
K
469 1MANGANESE (II) ION
lig 52
MN
K
470 1MANGANESE (II) ION
lig 53
ADP
K
4481 27ADENOSINE-5'-DIPHOSPHATE
lig 54
MPD
K
5492 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 55
MPD
K
5493 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 56
MN
L
469 1MANGANESE (II) ION
lig 57
MN
L
470 1MANGANESE (II) ION
lig 58
ADP
L
4482 27ADENOSINE-5'-DIPHOSPHATE
lig 59
MPD
L
5483 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 60
MPD
L
5494 8(4S)-2-METHYL-2,4-PENTANEDIOL