Analysis of Ligand-Protein Contacts in PDB entry:
1IR2


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 168 ligands in PDB entry 1IR2. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
HYP
A
104 84-HYDROXYPROLINE
lig 2
HYP
A
151 84-HYDROXYPROLINE
lig 3
KCX
A
201 12LYSINE NZ-CARBOXYLIC ACID
lig 4
SMC
A
256 7S-METHYLCYSTEINE
lig 5
SMC
A
369 7S-METHYLCYSTEINE
lig 6
MME
I
1 9N-METHYL METHIONINE
lig 7
HYP
B
104 84-HYDROXYPROLINE
lig 8
HYP
B
151 84-HYDROXYPROLINE
lig 9
KCX
B
201 12LYSINE NZ-CARBOXYLIC ACID
lig 10
SMC
B
256 7S-METHYLCYSTEINE
lig 11
SMC
B
369 7S-METHYLCYSTEINE
lig 12
MME
J
1 9N-METHYL METHIONINE
lig 13
HYP
C
104 84-HYDROXYPROLINE
lig 14
HYP
C
151 84-HYDROXYPROLINE
lig 15
KCX
C
201 12LYSINE NZ-CARBOXYLIC ACID
lig 16
SMC
C
256 7S-METHYLCYSTEINE
lig 17
SMC
C
369 7S-METHYLCYSTEINE
lig 18
MME
K
1 9N-METHYL METHIONINE
lig 19
HYP
D
104 84-HYDROXYPROLINE
lig 20
HYP
D
151 84-HYDROXYPROLINE
lig 21
KCX
D
201 12LYSINE NZ-CARBOXYLIC ACID
lig 22
SMC
D
256 7S-METHYLCYSTEINE
lig 23
SMC
D
369 7S-METHYLCYSTEINE
lig 24
MME
L
1 9N-METHYL METHIONINE
lig 25
HYP
E
104 84-HYDROXYPROLINE
lig 26
HYP
E
151 84-HYDROXYPROLINE
lig 27
KCX
E
201 12LYSINE NZ-CARBOXYLIC ACID
lig 28
SMC
E
256 7S-METHYLCYSTEINE
lig 29
SMC
E
369 7S-METHYLCYSTEINE
lig 30
MME
M
1 9N-METHYL METHIONINE
lig 31
HYP
F
104 84-HYDROXYPROLINE
lig 32
HYP
F
151 84-HYDROXYPROLINE
lig 33
KCX
F
201 12LYSINE NZ-CARBOXYLIC ACID
lig 34
SMC
F
256 7S-METHYLCYSTEINE
lig 35
SMC
F
369 7S-METHYLCYSTEINE
lig 36
MME
N
1 9N-METHYL METHIONINE
lig 37
HYP
G
104 84-HYDROXYPROLINE
lig 38
HYP
G
151 84-HYDROXYPROLINE
lig 39
KCX
G
201 12LYSINE NZ-CARBOXYLIC ACID
lig 40
SMC
G
256 7S-METHYLCYSTEINE
lig 41
SMC
G
369 7S-METHYLCYSTEINE
lig 42
MME
O
1 9N-METHYL METHIONINE
lig 43
HYP
H
104 84-HYDROXYPROLINE
lig 44
HYP
H
151 84-HYDROXYPROLINE
lig 45
KCX
H
201 12LYSINE NZ-CARBOXYLIC ACID
lig 46
SMC
H
256 7S-METHYLCYSTEINE
lig 47
SMC
H
369 7S-METHYLCYSTEINE
lig 48
MME
P
1 9N-METHYL METHIONINE
lig 49
HYP
S
104 84-HYDROXYPROLINE
lig 50
HYP
S
151 84-HYDROXYPROLINE
lig 51
KCX
S
201 12LYSINE NZ-CARBOXYLIC ACID
lig 52
SMC
S
256 7S-METHYLCYSTEINE
lig 53
SMC
S
369 7S-METHYLCYSTEINE
lig 54
MME
1
1 9N-METHYL METHIONINE
lig 55
HYP
T
104 84-HYDROXYPROLINE
lig 56
HYP
T
151 84-HYDROXYPROLINE
lig 57
KCX
T
201 12LYSINE NZ-CARBOXYLIC ACID
lig 58
SMC
T
256 7S-METHYLCYSTEINE
lig 59
SMC
T
369 7S-METHYLCYSTEINE
lig 60
MME
2
1 9N-METHYL METHIONINE
lig 61
HYP
U
104 84-HYDROXYPROLINE
lig 62
HYP
U
151 84-HYDROXYPROLINE
lig 63
KCX
U
201 12LYSINE NZ-CARBOXYLIC ACID
lig 64
SMC
U
256 7S-METHYLCYSTEINE
lig 65
SMC
U
369 7S-METHYLCYSTEINE
lig 66
MME
3
1 9N-METHYL METHIONINE
lig 67
HYP
V
104 84-HYDROXYPROLINE
lig 68
HYP
V
151 84-HYDROXYPROLINE
lig 69
KCX
V
201 12LYSINE NZ-CARBOXYLIC ACID
lig 70
SMC
V
256 7S-METHYLCYSTEINE
lig 71
SMC
V
369 7S-METHYLCYSTEINE
lig 72
MME
4
1 9N-METHYL METHIONINE
lig 73
HYP
W
104 84-HYDROXYPROLINE
lig 74
HYP
W
151 84-HYDROXYPROLINE
lig 75
KCX
W
201 12LYSINE NZ-CARBOXYLIC ACID
lig 76
SMC
W
256 7S-METHYLCYSTEINE
lig 77
SMC
W
369 7S-METHYLCYSTEINE
lig 78
MME
5
1 9N-METHYL METHIONINE
lig 79
HYP
X
104 84-HYDROXYPROLINE
lig 80
HYP
X
151 84-HYDROXYPROLINE
lig 81
KCX
X
201 12LYSINE NZ-CARBOXYLIC ACID
lig 82
SMC
X
256 7S-METHYLCYSTEINE
lig 83
SMC
X
369 7S-METHYLCYSTEINE
lig 84
MME
6
1 9N-METHYL METHIONINE
lig 85
HYP
Y
104 84-HYDROXYPROLINE
lig 86
HYP
Y
151 84-HYDROXYPROLINE
lig 87
KCX
Y
201 12LYSINE NZ-CARBOXYLIC ACID
lig 88
SMC
Y
256 7S-METHYLCYSTEINE
lig 89
SMC
Y
369 7S-METHYLCYSTEINE
lig 90
MME
7
1 9N-METHYL METHIONINE
lig 91
HYP
Z
104 84-HYDROXYPROLINE
lig 92
HYP
Z
151 84-HYDROXYPROLINE
lig 93
KCX
Z
201 12LYSINE NZ-CARBOXYLIC ACID
lig 94
SMC
Z
256 7S-METHYLCYSTEINE
lig 95
SMC
Z
369 7S-METHYLCYSTEINE
lig 96
MME
8
1 9N-METHYL METHIONINE
lig 97
MG
A
476 1MAGNESIUM ION
lig 98
CAP
A
501 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 99
GOL
A
605 6GLYCEROL
lig 100
GOL
A
613 6GLYCEROL
lig 101
MG
B
476 1MAGNESIUM ION
lig 102
CAP
B
501 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 103
GOL
B
606 6GLYCEROL
lig 104
GOL
B
610 6GLYCEROL
lig 105
GOL
B
614 6GLYCEROL
lig 106
MG
C
476 1MAGNESIUM ION
lig 107
CAP
C
501 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 108
GOL
C
607 6GLYCEROL
lig 109
GOL
C
615 6GLYCEROL
lig 110
MG
D
476 1MAGNESIUM ION
lig 111
CAP
D
501 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 112
GOL
D
608 6GLYCEROL
lig 113
GOL
D
616 6GLYCEROL
lig 114
MG
E
476 1MAGNESIUM ION
lig 115
CAP
E
501 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 116
GOL
E
601 6GLYCEROL
lig 117
GOL
E
609 6GLYCEROL
lig 118
GOL
E
620 6GLYCEROL
lig 119
MG
F
476 1MAGNESIUM ION
lig 120
CAP
F
501 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 121
GOL
F
602 6GLYCEROL
lig 122
GOL
F
617 6GLYCEROL
lig 123
MG
G
476 1MAGNESIUM ION
lig 124
CAP
G
501 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 125
GOL
G
603 6GLYCEROL
lig 126
GOL
G
611 6GLYCEROL
lig 127
GOL
G
618 6GLYCEROL
lig 128
MG
H
476 1MAGNESIUM ION
lig 129
CAP
H
501 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 130
GOL
H
604 6GLYCEROL
lig 131
GOL
H
612 6GLYCEROL
lig 132
GOL
H
619 6GLYCEROL
lig 133
MG
S
476 1MAGNESIUM ION
lig 134
CAP
S
501 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 135
GOL
S
605 6GLYCEROL
lig 136
GOL
S
609 6GLYCEROL
lig 137
GOL
S
613 6GLYCEROL
lig 138
MG
T
476 1MAGNESIUM ION
lig 139
CAP
T
501 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 140
GOL
T
606 6GLYCEROL
lig 141
GOL
T
614 6GLYCEROL
lig 142
MG
U
476 1MAGNESIUM ION
lig 143
CAP
U
501 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 144
GOL
U
607 6GLYCEROL
lig 145
GOL
U
615 6GLYCEROL
lig 146
MG
V
476 1MAGNESIUM ION
lig 147
CAP
V
501 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 148
GOL
V
608 6GLYCEROL
lig 149
GOL
V
616 6GLYCEROL
lig 150
MG
W
476 1MAGNESIUM ION
lig 151
CAP
W
501 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 152
GOL
W
601 6GLYCEROL
lig 153
GOL
W
620 6GLYCEROL
lig 154
MG
X
476 1MAGNESIUM ION
lig 155
CAP
X
501 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 156
GOL
X
602 6GLYCEROL
lig 157
GOL
X
610 6GLYCEROL
lig 158
GOL
X
617 6GLYCEROL
lig 159
MG
Y
476 1MAGNESIUM ION
lig 160
CAP
Y
501 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 161
GOL
Y
603 6GLYCEROL
lig 162
GOL
Y
611 6GLYCEROL
lig 163
GOL
Y
618 6GLYCEROL
lig 164
MG
Z
476 1MAGNESIUM ION
lig 165
CAP
Z
501 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 166
GOL
Z
604 6GLYCEROL
lig 167
GOL
Z
612 6GLYCEROL
lig 168
GOL
Z
619 6GLYCEROL