Analysis of Ligand-Protein Contacts in PDB entry:
1MWE


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 1MWE. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
B
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
B
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
B
5 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
B
6 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
B
7 11ALPHA-D-MANNOPYRANOSE
lig 8
MAN
B
8 11ALPHA-D-MANNOPYRANOSE
lig 9
MAN
B
9 11ALPHA-D-MANNOPYRANOSE
lig 10
NAG
A
478 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
A
479 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
A
480 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
SIA
A
1 21N-ACETYL-ALPHA-NEURAMINIC ACID
lig 14
SIA
A
2 21N-ACETYL-ALPHA-NEURAMINIC ACID
lig 15
CA
A
999 1CALCIUM ION
lig 16
CA
A
998 1CALCIUM ION