Analysis of Ligand-Protein Contacts in PDB entry:
1NKH


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 15 ligands in PDB entry 1NKH. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CA
A
805 1CALCIUM ION
lig 2
SO4
A
819 5SULFATE ION
lig 3
PG4
A
813 13TETRAETHYLENE GLYCOL
lig 4
MN
B
807 1MANGANESE (II) ION
lig 5
UDP
B
809 25URIDINE-5'-DIPHOSPHATE
lig 6
UDP
B
811 25URIDINE-5'-DIPHOSPHATE
lig 7
PG4
B
815 13TETRAETHYLENE GLYCOL
lig 8
PG4
B
817 13TETRAETHYLENE GLYCOL
lig 9
CA
C
806 1CALCIUM ION
lig 10
PG4
C
814 13TETRAETHYLENE GLYCOL
lig 11
MN
D
808 1MANGANESE (II) ION
lig 12
SO4
D
818 5SULFATE ION
lig 13
UDP
D
810 25URIDINE-5'-DIPHOSPHATE
lig 14
UDP
D
812 25URIDINE-5'-DIPHOSPHATE
lig 15
PG4
D
816 13TETRAETHYLENE GLYCOL