Analysis of Ligand-Protein Contacts in PDB entry:
1P0P


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 15 ligands in PDB entry 1P0P. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
FUC
B
3 10ALPHA-L-FUCOPYRANOSE
lig 4
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
FUC
C
3 10ALPHA-L-FUCOPYRANOSE
lig 7
NAG
A
536 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
A
537 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
A
538 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
SO4
A
603 5SULFATE ION
lig 11
CL
A
701 1CHLORIDE ION
lig 12
CL
A
702 1CHLORIDE ION
lig 13
VXA
A
601 4METHYLPHOSPHONIC ACID ESTER GROUP
lig 14
BCH
A
604 122-(BUTYRYLSULFANYL)-N,N,N-TRIMETHYLETHANAM
lig 15
GOL
A
602 6GLYCEROL