Analysis of Ligand-Protein Contacts in PDB entry:
1P0Q


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 13 ligands in PDB entry 1P0Q. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
FUC
B
3 10ALPHA-L-FUCOPYRANOSE
lig 4
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
FUC
C
3 10ALPHA-L-FUCOPYRANOSE
lig 7
NAG
A
536 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
A
537 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
SO4
A
603 5SULFATE ION
lig 10
CL
A
701 1CHLORIDE ION
lig 11
VXA
A
601 4METHYLPHOSPHONIC ACID ESTER GROUP
lig 12
GOL
A
602 6GLYCEROL
lig 13
GOL
A
604 6GLYCEROL