Analysis of Ligand-Protein Contacts in PDB entry:
1PPF


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 1PPF. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
E
401 14N-ACETYL-D-GLUCOSAMINE
lig 2
FUC
E
402 10ALPHA-L-FUCOSE
lig 3
NAG
E
403 14N-ACETYL-D-GLUCOSAMINE
lig 4
BMA
E
404 11BETA-D-MANNOSE
lig 5
MAN
E
405 11ALPHA-D-MANNOSE
lig 6
NAG
E
406 14N-ACETYL-D-GLUCOSAMINE
lig 7
GAL
E
407 11BETA-D-GALACTOSE
lig 8
MAN
E
408 11ALPHA-D-MANNOSE
lig 9
NAG
E
411 14N-ACETYL-D-GLUCOSAMINE
lig 10
FUC
E
412 10ALPHA-L-FUCOSE
lig 11
NAG
E
413 14N-ACETYL-D-GLUCOSAMINE
lig 12
BMA
E
414 11BETA-D-MANNOSE
lig 13
MAN
E
415 11ALPHA-D-MANNOSE
lig 14
NAG
E
416 14N-ACETYL-D-GLUCOSAMINE
lig 15
GLC
E
417 11ALPHA-D-GLUCOSE
lig 16
MAN
E
418 11ALPHA-D-MANNOSE