Analysis of Ligand-Protein Contacts in PDB entry:
1VEL


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 14 ligands in PDB entry 1VEL. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CD
A
201 1CADMIUM ION
lig 2
CD
A
207 1CADMIUM ION
lig 3
NA
A
211 1SODIUM ION
lig 4
SO4
A
601 5SULFATE ION
lig 5
CD
B
202 1CADMIUM ION
lig 6
CD
C
205 1CADMIUM ION
lig 7
CD
C
210 1CADMIUM ION
lig 8
CD
D
204 1CADMIUM ION
lig 9
CD
D
208 1CADMIUM ION
lig 10
CD
D
209 1CADMIUM ION
lig 11
NA
D
212 1SODIUM ION
lig 12
SO4
D
602 5SULFATE ION
lig 13
CD
E
203 1CADMIUM ION
lig 14
CD
F
206 1CADMIUM ION