Analysis of Ligand-Protein Contacts in PDB entry:
1VQN


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 321 ligands in PDB entry 1VQN. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
1MA
0
628 236-HYDRO-1-METHYLADENOSINE-5'-MONOPHOSPHATE
lig 2
OMU
0
2587 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 3
OMG
0
2588 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 4
UR3
0
2619 213-METHYLURIDINE-5'-MONOPHOSHATE
lig 5
PSU
0
2621 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 6
PPU
4
76 24PUROMYCIN-5'-MONOPHOSPHATE
lig 7
HFA
4
77 11ALPHA-HYDROXY-BETA-PHENYL-PROPIONIC ACID
lig 8
ACA
5
78 86-AMINOHEXANOIC ACID
lig 9
BTN
5
79 15BIOTIN
lig 10
MG
0
8001 1MAGNESIUM ION
lig 11
MG
0
8002 1MAGNESIUM ION
lig 12
MG
0
8003 1MAGNESIUM ION
lig 13
MG
0
8004 1MAGNESIUM ION
lig 14
MG
0
8005 1MAGNESIUM ION
lig 15
MG
0
8008 1MAGNESIUM ION
lig 16
MG
0
8009 1MAGNESIUM ION
lig 17
MG
0
8012 1MAGNESIUM ION
lig 18
MG
0
8013 1MAGNESIUM ION
lig 19
MG
0
8014 1MAGNESIUM ION
lig 20
MG
0
8015 1MAGNESIUM ION
lig 21
MG
0
8017 1MAGNESIUM ION
lig 22
MG
0
8019 1MAGNESIUM ION
lig 23
MG
0
8020 1MAGNESIUM ION
lig 24
MG
0
8021 1MAGNESIUM ION
lig 25
MG
0
8022 1MAGNESIUM ION
lig 26
MG
0
8024 1MAGNESIUM ION
lig 27
MG
0
8025 1MAGNESIUM ION
lig 28
MG
0
8026 1MAGNESIUM ION
lig 29
MG
0
8027 1MAGNESIUM ION
lig 30
MG
0
8028 1MAGNESIUM ION
lig 31
MG
0
8029 1MAGNESIUM ION
lig 32
MG
0
8030 1MAGNESIUM ION
lig 33
MG
0
8031 1MAGNESIUM ION
lig 34
MG
0
8032 1MAGNESIUM ION
lig 35
MG
0
8036 1MAGNESIUM ION
lig 36
MG
0
8037 1MAGNESIUM ION
lig 37
MG
0
8038 1MAGNESIUM ION
lig 38
MG
0
8039 1MAGNESIUM ION
lig 39
MG
0
8040 1MAGNESIUM ION
lig 40
MG
0
8041 1MAGNESIUM ION
lig 41
MG
0
8042 1MAGNESIUM ION
lig 42
MG
0
8043 1MAGNESIUM ION
lig 43
MG
0
8044 1MAGNESIUM ION
lig 44
MG
0
8045 1MAGNESIUM ION
lig 45
MG
0
8046 1MAGNESIUM ION
lig 46
MG
0
8047 1MAGNESIUM ION
lig 47
MG
0
8050 1MAGNESIUM ION
lig 48
MG
0
8051 1MAGNESIUM ION
lig 49
MG
0
8052 1MAGNESIUM ION
lig 50
MG
0
8054 1MAGNESIUM ION
lig 51
MG
0
8055 1MAGNESIUM ION
lig 52
MG
0
8056 1MAGNESIUM ION
lig 53
MG
0
8057 1MAGNESIUM ION
lig 54
MG
0
8058 1MAGNESIUM ION
lig 55
MG
0
8059 1MAGNESIUM ION
lig 56
MG
0
8060 1MAGNESIUM ION
lig 57
MG
0
8061 1MAGNESIUM ION
lig 58
MG
0
8063 1MAGNESIUM ION
lig 59
MG
0
8065 1MAGNESIUM ION
lig 60
MG
0
8067 1MAGNESIUM ION
lig 61
MG
0
8068 1MAGNESIUM ION
lig 62
MG
0
8070 1MAGNESIUM ION
lig 63
MG
0
8072 1MAGNESIUM ION
lig 64
MG
0
8074 1MAGNESIUM ION
lig 65
MG
0
8075 1MAGNESIUM ION
lig 66
MG
0
8079 1MAGNESIUM ION
lig 67
MG
0
8080 1MAGNESIUM ION
lig 68
MG
0
8082 1MAGNESIUM ION
lig 69
MG
0
8083 1MAGNESIUM ION
lig 70
MG
0
8084 1MAGNESIUM ION
lig 71
MG
0
8085 1MAGNESIUM ION
lig 72
MG
0
8088 1MAGNESIUM ION
lig 73
MG
0
8089 1MAGNESIUM ION
lig 74
MG
0
8090 1MAGNESIUM ION
lig 75
MG
0
8091 1MAGNESIUM ION
lig 76
MG
0
8092 1MAGNESIUM ION
lig 77
MG
0
8093 1MAGNESIUM ION
lig 78
MG
0
8094 1MAGNESIUM ION
lig 79
MG
0
8096 1MAGNESIUM ION
lig 80
MG
0
8097 1MAGNESIUM ION
lig 81
MG
0
8098 1MAGNESIUM ION
lig 82
MG
0
8099 1MAGNESIUM ION
lig 83
MG
0
8101 1MAGNESIUM ION
lig 84
MG
0
8102 1MAGNESIUM ION
lig 85
MG
0
8103 1MAGNESIUM ION
lig 86
MG
0
8104 1MAGNESIUM ION
lig 87
MG
0
8106 1MAGNESIUM ION
lig 88
MG
0
8107 1MAGNESIUM ION
lig 89
MG
0
8108 1MAGNESIUM ION
lig 90
MG
0
8110 1MAGNESIUM ION
lig 91
MG
0
8112 1MAGNESIUM ION
lig 92
MG
0
8113 1MAGNESIUM ION
lig 93
MG
0
8114 1MAGNESIUM ION
lig 94
MG
0
8115 1MAGNESIUM ION
lig 95
MG
0
8116 1MAGNESIUM ION
lig 96
MG
0
8117 1MAGNESIUM ION
lig 97
K
0
9001 1POTASSIUM ION
lig 98
K
0
9002 1POTASSIUM ION
lig 99
NA
0
9101 1SODIUM ION
lig 100
NA
0
9102 1SODIUM ION
lig 101
NA
0
9105 1SODIUM ION
lig 102
NA
0
9106 1SODIUM ION
lig 103
NA
0
9107 1SODIUM ION
lig 104
NA
0
9108 1SODIUM ION
lig 105
NA
0
9110 1SODIUM ION
lig 106
NA
0
9111 1SODIUM ION
lig 107
NA
0
9113 1SODIUM ION
lig 108
NA
0
9114 1SODIUM ION
lig 109
NA
0
9115 1SODIUM ION
lig 110
NA
0
9116 1SODIUM ION
lig 111
NA
0
9117 1SODIUM ION
lig 112
NA
0
9118 1SODIUM ION
lig 113
NA
0
9120 1SODIUM ION
lig 114
NA
0
9122 1SODIUM ION
lig 115
NA
0
9123 1SODIUM ION
lig 116
NA
0
9124 1SODIUM ION
lig 117
NA
0
9125 1SODIUM ION
lig 118
NA
0
9126 1SODIUM ION
lig 119
NA
0
9127 1SODIUM ION
lig 120
NA
0
9128 1SODIUM ION
lig 121
NA
0
9129 1SODIUM ION
lig 122
NA
0
9130 1SODIUM ION
lig 123
NA
0
9131 1SODIUM ION
lig 124
NA
0
9132 1SODIUM ION
lig 125
NA
0
9134 1SODIUM ION
lig 126
NA
0
9135 1SODIUM ION
lig 127
NA
0
9136 1SODIUM ION
lig 128
NA
0
9138 1SODIUM ION
lig 129
NA
0
9139 1SODIUM ION
lig 130
NA
0
9140 1SODIUM ION
lig 131
NA
0
9141 1SODIUM ION
lig 132
NA
0
9143 1SODIUM ION
lig 133
NA
0
9149 1SODIUM ION
lig 134
NA
0
9150 1SODIUM ION
lig 135
NA
0
9152 1SODIUM ION
lig 136
NA
0
9154 1SODIUM ION
lig 137
NA
0
9155 1SODIUM ION
lig 138
NA
0
9156 1SODIUM ION
lig 139
NA
0
9157 1SODIUM ION
lig 140
NA
0
9158 1SODIUM ION
lig 141
NA
0
9159 1SODIUM ION
lig 142
NA
0
9160 1SODIUM ION
lig 143
NA
0
9161 1SODIUM ION
lig 144
NA
0
9162 1SODIUM ION
lig 145
NA
0
9163 1SODIUM ION
lig 146
NA
0
9164 1SODIUM ION
lig 147
NA
0
9165 1SODIUM ION
lig 148
NA
0
9166 1SODIUM ION
lig 149
NA
0
9167 1SODIUM ION
lig 150
NA
0
9168 1SODIUM ION
lig 151
NA
0
9169 1SODIUM ION
lig 152
NA
0
9170 1SODIUM ION
lig 153
NA
0
9171 1SODIUM ION
lig 154
NA
0
9172 1SODIUM ION
lig 155
NA
0
9173 1SODIUM ION
lig 156
NA
0
9174 1SODIUM ION
lig 157
NA
0
9175 1SODIUM ION
lig 158
NA
0
9177 1SODIUM ION
lig 159
NA
0
9178 1SODIUM ION
lig 160
NA
0
9179 1SODIUM ION
lig 161
NA
0
9181 1SODIUM ION
lig 162
NA
0
9182 1SODIUM ION
lig 163
NA
0
9184 1SODIUM ION
lig 164
NA
0
9185 1SODIUM ION
lig 165
CL
0
9303 1CHLORIDE ION
lig 166
CL
0
9305 1CHLORIDE ION
lig 167
CL
0
9311 1CHLORIDE ION
lig 168
CL
0
9312 1CHLORIDE ION
lig 169
CL
0
9313 1CHLORIDE ION
lig 170
CL
0
9314 1CHLORIDE ION
lig 171
CL
0
9315 1CHLORIDE ION
lig 172
CL
0
9316 1CHLORIDE ION
lig 173
CL
0
9317 1CHLORIDE ION
lig 174
CL
0
9322 1CHLORIDE ION
lig 175
SR
0
9405 1STRONTIUM ION
lig 176
SR
0
9406 1STRONTIUM ION
lig 177
SR
0
9407 1STRONTIUM ION
lig 178
SR
0
9408 1STRONTIUM ION
lig 179
SR
0
9410 1STRONTIUM ION
lig 180
SR
0
9411 1STRONTIUM ION
lig 181
SR
0
9412 1STRONTIUM ION
lig 182
SR
0
9413 1STRONTIUM ION
lig 183
SR
0
9414 1STRONTIUM ION
lig 184
SR
0
9415 1STRONTIUM ION
lig 185
SR
0
9416 1STRONTIUM ION
lig 186
SR
0
9417 1STRONTIUM ION
lig 187
SR
0
9420 1STRONTIUM ION
lig 188
SR
0
9421 1STRONTIUM ION
lig 189
SR
0
9422 1STRONTIUM ION
lig 190
SR
0
9423 1STRONTIUM ION
lig 191
SR
0
9424 1STRONTIUM ION
lig 192
SR
0
9425 1STRONTIUM ION
lig 193
SR
0
9426 1STRONTIUM ION
lig 194
SR
0
9427 1STRONTIUM ION
lig 195
SR
0
9428 1STRONTIUM ION
lig 196
SR
0
9429 1STRONTIUM ION
lig 197
SR
0
9430 1STRONTIUM ION
lig 198
SR
0
9431 1STRONTIUM ION
lig 199
SR
0
9432 1STRONTIUM ION
lig 200
SR
0
9433 1STRONTIUM ION
lig 201
SR
0
9434 1STRONTIUM ION
lig 202
SR
0
9435 1STRONTIUM ION
lig 203
SR
0
9438 1STRONTIUM ION
lig 204
SR
0
9440 1STRONTIUM ION
lig 205
SR
0
9441 1STRONTIUM ION
lig 206
SR
0
9442 1STRONTIUM ION
lig 207
SR
0
9443 1STRONTIUM ION
lig 208
SR
0
9444 1STRONTIUM ION
lig 209
SR
0
9445 1STRONTIUM ION
lig 210
SR
0
9446 1STRONTIUM ION
lig 211
SR
0
9447 1STRONTIUM ION
lig 212
SR
0
9448 1STRONTIUM ION
lig 213
SR
0
9449 1STRONTIUM ION
lig 214
SR
0
9450 1STRONTIUM ION
lig 215
SR
0
9451 1STRONTIUM ION
lig 216
SR
0
9452 1STRONTIUM ION
lig 217
SR
0
9453 1STRONTIUM ION
lig 218
SR
0
9454 1STRONTIUM ION
lig 219
SR
0
9455 1STRONTIUM ION
lig 220
SR
0
9456 1STRONTIUM ION
lig 221
SR
0
9457 1STRONTIUM ION
lig 222
SR
0
9459 1STRONTIUM ION
lig 223
SR
0
9461 1STRONTIUM ION
lig 224
SR
0
9462 1STRONTIUM ION
lig 225
SR
0
9464 1STRONTIUM ION
lig 226
SR
0
9465 1STRONTIUM ION
lig 227
SR
0
9466 1STRONTIUM ION
lig 228
SR
0
9467 1STRONTIUM ION
lig 229
SR
0
9468 1STRONTIUM ION
lig 230
SR
0
9469 1STRONTIUM ION
lig 231
SR
0
9473 1STRONTIUM ION
lig 232
SR
0
9474 1STRONTIUM ION
lig 233
SR
0
9475 1STRONTIUM ION
lig 234
SR
0
9477 1STRONTIUM ION
lig 235
SR
0
9478 1STRONTIUM ION
lig 236
SR
0
9480 1STRONTIUM ION
lig 237
SR
0
9482 1STRONTIUM ION
lig 238
SR
0
9483 1STRONTIUM ION
lig 239
SR
0
9484 1STRONTIUM ION
lig 240
SR
0
9488 1STRONTIUM ION
lig 241
SR
0
9489 1STRONTIUM ION
lig 242
SR
0
9490 1STRONTIUM ION
lig 243
SR
0
9495 1STRONTIUM ION
lig 244
SR
0
9498 1STRONTIUM ION
lig 245
SR
0
9500 1STRONTIUM ION
lig 246
SR
0
9501 1STRONTIUM ION
lig 247
SR
0
9504 1STRONTIUM ION
lig 248
SR
0
9505 1STRONTIUM ION
lig 249
SR
0
9506 1STRONTIUM ION
lig 250
SR
0
9508 1STRONTIUM ION
lig 251
SR
0
9509 1STRONTIUM ION
lig 252
SR
0
9515 1STRONTIUM ION
lig 253
SR
0
9517 1STRONTIUM ION
lig 254
SR
0
9522 1STRONTIUM ION
lig 255
SR
0
9529 1STRONTIUM ION
lig 256
SR
0
9530 1STRONTIUM ION
lig 257
SR
0
9532 1STRONTIUM ION
lig 258
SR
0
9534 1STRONTIUM ION
lig 259
SR
0
9537 1STRONTIUM ION
lig 260
SR
0
9539 1STRONTIUM ION
lig 261
SR
0
9545 1STRONTIUM ION
lig 262
SR
0
9547 1STRONTIUM ION
lig 263
SR
0
9560 1STRONTIUM ION
lig 264
SR
0
9566 1STRONTIUM ION
lig 265
SR
0
9568 1STRONTIUM ION
lig 266
SR
0
9570 1STRONTIUM ION
lig 267
SR
0
9581 1STRONTIUM ION
lig 268
SR
0
9585 1STRONTIUM ION
lig 269
SR
0
9590 1STRONTIUM ION
lig 270
SR
0
9601 1STRONTIUM ION
lig 271
SR
0
9626 1STRONTIUM ION
lig 272
SR
0
9629 1STRONTIUM ION
lig 273
MG
9
8095 1MAGNESIUM ION
lig 274
NA
9
9183 1SODIUM ION
lig 275
SR
9
9481 1STRONTIUM ION
lig 276
SR
9
9503 1STRONTIUM ION
lig 277
SR
9
9588 1STRONTIUM ION
lig 278
MG
5
8118 1MAGNESIUM ION
lig 279
MG
A
8066 1MAGNESIUM ION
lig 280
CL
A
9309 1CHLORIDE ION
lig 281
SR
A
9436 1STRONTIUM ION
lig 282
SR
A
9437 1STRONTIUM ION
lig 283
SR
A
9497 1STRONTIUM ION
lig 284
CL
B
9319 1CHLORIDE ION
lig 285
SR
B
9458 1STRONTIUM ION
lig 286
SR
B
9521 1STRONTIUM ION
lig 287
NA
C
9104 1SODIUM ION
lig 288
NA
D
9151 1SODIUM ION
lig 289
SR
F
9595 1STRONTIUM ION
lig 290
SR
H
9486 1STRONTIUM ION
lig 291
NA
J
9146 1SODIUM ION
lig 292
CL
J
9301 1CHLORIDE ION
lig 293
CL
J
9302 1CHLORIDE ION
lig 294
CL
J
9321 1CHLORIDE ION
lig 295
MG
K
8069 1MAGNESIUM ION
lig 296
CL
L
9310 1CHLORIDE ION
lig 297
SR
L
9409 1STRONTIUM ION
lig 298
NA
M
9147 1SODIUM ION
lig 299
CL
M
9318 1CHLORIDE ION
lig 300
CL
N
9307 1CHLORIDE ION
lig 301
CD
O
9205 1CADMIUM ION
lig 302
CL
O
9308 1CHLORIDE ION
lig 303
NA
Q
9148 1SODIUM ION
lig 304
NA
R
9137 1SODIUM ION
lig 305
NA
R
9186 1SODIUM ION
lig 306
CL
R
9306 1CHLORIDE ION
lig 307
SR
R
9418 1STRONTIUM ION
lig 308
NA
S
9112 1SODIUM ION
lig 309
SR
S
9470 1STRONTIUM ION
lig 310
MG
T
8073 1MAGNESIUM ION
lig 311
CD
U
9201 1CADMIUM ION
lig 312
MG
Y
8109 1MAGNESIUM ION
lig 313
CL
Y
9320 1CHLORIDE ION
lig 314
CD
Z
9203 1CADMIUM ION
lig 315
CD
1
9202 1CADMIUM ION
lig 316
SR
1
9419 1STRONTIUM ION
lig 317
SR
1
9460 1STRONTIUM ION
lig 318
MG
2
8076 1MAGNESIUM ION
lig 319
CD
3
9204 1CADMIUM ION
lig 320
CL
3
9304 1CHLORIDE ION
lig 321
SR
3
9439 1STRONTIUM ION