Analysis of Ligand-Protein Contacts in PDB entry:
1W20


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 43 ligands in PDB entry 1W20. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
BMA
G
2 11BETA-D-MANNOPYRANOSE
lig 7
MAN
G
3 11ALPHA-D-MANNOPYRANOSE
lig 8
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
SIA
A
1477 21N-ACETYL-ALPHA-NEURAMINIC ACID
lig 11
SIA
A
1478 21N-ACETYL-ALPHA-NEURAMINIC ACID
lig 12
GOL
A
1479 6GLYCEROL
lig 13
NAG
A
1480 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
A
1481 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
BMA
A
1484 11BETA-D-MANNOPYRANOSE
lig 16
MAN
A
1485 11ALPHA-D-MANNOPYRANOSE
lig 17
MAN
A
1486 11ALPHA-D-MANNOPYRANOSE
lig 18
MAN
A
1487 11ALPHA-D-MANNOPYRANOSE
lig 19
CA
A
1488 1CALCIUM ION
lig 20
SIA
B
2477 21N-ACETYL-ALPHA-NEURAMINIC ACID
lig 21
SIA
B
2478 21N-ACETYL-ALPHA-NEURAMINIC ACID
lig 22
GOL
B
2479 6GLYCEROL
lig 23
NAG
B
2480 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
BMA
B
2483 11BETA-D-MANNOPYRANOSE
lig 25
MAN
B
2484 11ALPHA-D-MANNOPYRANOSE
lig 26
MAN
B
2485 11ALPHA-D-MANNOPYRANOSE
lig 27
MAN
B
2486 11ALPHA-D-MANNOPYRANOSE
lig 28
CA
B
2487 1CALCIUM ION
lig 29
SIA
C
3477 21N-ACETYL-ALPHA-NEURAMINIC ACID
lig 30
SIA
C
3478 21N-ACETYL-ALPHA-NEURAMINIC ACID
lig 31
GOL
C
3479 6GLYCEROL
lig 32
NAG
C
3481 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
MAN
C
3485 11ALPHA-D-MANNOPYRANOSE
lig 34
MAN
C
3486 11ALPHA-D-MANNOPYRANOSE
lig 35
MAN
C
3488 11ALPHA-D-MANNOPYRANOSE
lig 36
MAN
C
3489 11ALPHA-D-MANNOPYRANOSE
lig 37
BMA
C
3490 11BETA-D-MANNOPYRANOSE
lig 38
CA
C
3491 1CALCIUM ION
lig 39
SIA
D
4477 21N-ACETYL-ALPHA-NEURAMINIC ACID
lig 40
SIA
D
4478 21N-ACETYL-ALPHA-NEURAMINIC ACID
lig 41
GOL
D
4479 6GLYCEROL
lig 42
NAG
D
4480 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 43
CA
D
4481 1CALCIUM ION