Analysis of Ligand-Protein Contacts in PDB entry:
1Y9A


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 17 ligands in PDB entry 1Y9A. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
OHS
A
245 12O-(CARBOXYSULFANYL)-4-OXO-L-HOMOSERINE
lig 2
OHS
C
245 12O-(CARBOXYSULFANYL)-4-OXO-L-HOMOSERINE
lig 3
ZN
A
1000 1ZINC ION
lig 4
CAC
A
1001 5CACODYLATE ION
lig 5
ZN
A
1002 1ZINC ION
lig 6
ACT
A
1004 4ACETATE ION
lig 7
MG
A
1005 1MAGNESIUM ION
lig 8
EDO
A
1003 41,2-ETHANEDIOL
lig 9
ZN
C
2000 1ZINC ION
lig 10
CAC
C
2001 5CACODYLATE ION
lig 11
ZN
C
2002 1ZINC ION
lig 12
ACT
C
2008 4ACETATE ION
lig 13
MG
C
2009 1MAGNESIUM ION
lig 14
EDO
C
2003 41,2-ETHANEDIOL
lig 15
EDO
C
2004 41,2-ETHANEDIOL
lig 16
EDO
C
2005 41,2-ETHANEDIOL
lig 17
EDO
C
2006 41,2-ETHANEDIOL