Analysis of Ligand-Protein Contacts in PDB entry:
1YFJ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 1YFJ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CL
1
602 1CHLORIDE ION
lig 2
CL
2
601 1CHLORIDE ION
lig 3
CL
2
603 1CHLORIDE ION
lig 4
CA
2
502 1CALCIUM ION
lig 5
CA
4
508 1CALCIUM ION
lig 6
CL
8
600 1CHLORIDE ION
lig 7
SAH
A
401 26S-ADENOSYL-L-HOMOCYSTEINE
lig 8
SAH
B
402 26S-ADENOSYL-L-HOMOCYSTEINE
lig 9
SAH
C
403 26S-ADENOSYL-L-HOMOCYSTEINE
lig 10
SAH
D
404 26S-ADENOSYL-L-HOMOCYSTEINE
lig 11
SAH
E
405 26S-ADENOSYL-L-HOMOCYSTEINE
lig 12
SAH
F
406 26S-ADENOSYL-L-HOMOCYSTEINE