Analysis of Ligand-Protein Contacts in PDB entry:
1YWH


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 108 ligands in PDB entry 1YWH. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
ALC
B
504 112-AMINO-3-CYCLOHEXYL-PROPIONIC ACID
lig 2
DSN
B
506 6D-SERINE
lig 3
DLY
B
507 9D-LYSINE
lig 4
ALC
D
504 112-AMINO-3-CYCLOHEXYL-PROPIONIC ACID
lig 5
DSN
D
506 6D-SERINE
lig 6
DLY
D
507 9D-LYSINE
lig 7
ALC
F
504 112-AMINO-3-CYCLOHEXYL-PROPIONIC ACID
lig 8
DSN
F
506 6D-SERINE
lig 9
DLY
F
507 9D-LYSINE
lig 10
ALC
H
504 112-AMINO-3-CYCLOHEXYL-PROPIONIC ACID
lig 11
DSN
H
506 6D-SERINE
lig 12
DLY
H
507 9D-LYSINE
lig 13
ALC
J
504 112-AMINO-3-CYCLOHEXYL-PROPIONIC ACID
lig 14
DSN
J
506 6D-SERINE
lig 15
DLY
J
507 9D-LYSINE
lig 16
ALC
L
504 112-AMINO-3-CYCLOHEXYL-PROPIONIC ACID
lig 17
DSN
L
506 6D-SERINE
lig 18
DLY
L
507 9D-LYSINE
lig 19
ALC
N
504 112-AMINO-3-CYCLOHEXYL-PROPIONIC ACID
lig 20
DSN
N
506 6D-SERINE
lig 21
DLY
N
507 9D-LYSINE
lig 22
ALC
P
504 112-AMINO-3-CYCLOHEXYL-PROPIONIC ACID
lig 23
DSN
P
506 6D-SERINE
lig 24
DLY
P
507 9D-LYSINE
lig 25
NAG
Q
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
NAG
Q
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
FUC
Q
3 10ALPHA-L-FUCOPYRANOSE
lig 28
NAG
R
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
FUC
R
2 10ALPHA-L-FUCOPYRANOSE
lig 30
NAG
S
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
NAG
S
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
FUC
S
3 10ALPHA-L-FUCOPYRANOSE
lig 33
NAG
T
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
NAG
T
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
FUC
T
3 10ALPHA-L-FUCOPYRANOSE
lig 36
NAG
U
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
FUC
U
2 10ALPHA-L-FUCOPYRANOSE
lig 38
NAG
V
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 39
FUC
V
2 10ALPHA-L-FUCOPYRANOSE
lig 40
NAG
W
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
NAG
W
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 42
NAG
X
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 43
FUC
X
2 10ALPHA-L-FUCOPYRANOSE
lig 44
NAG
Y
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 45
FUC
Y
2 10ALPHA-L-FUCOPYRANOSE
lig 46
NAG
Z
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
NAG
Z
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 48
BMA
Z
3 11BETA-D-MANNOPYRANOSE
lig 49
MAN
Z
4 11ALPHA-D-MANNOPYRANOSE
lig 50
MAN
Z
5 11ALPHA-D-MANNOPYRANOSE
lig 51
NAG
a
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 52
FUC
a
2 10ALPHA-L-FUCOPYRANOSE
lig 53
NAG
b
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 54
NAG
b
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 55
FUC
b
3 10ALPHA-L-FUCOPYRANOSE
lig 56
NAG
c
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 57
NAG
c
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 58
BMA
c
3 11BETA-D-MANNOPYRANOSE
lig 59
MAN
c
4 11ALPHA-D-MANNOPYRANOSE
lig 60
MAN
c
5 11ALPHA-D-MANNOPYRANOSE
lig 61
NAG
d
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 62
FUC
d
2 10ALPHA-L-FUCOPYRANOSE
lig 63
NAG
e
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 64
NAG
e
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 65
BMA
e
3 11BETA-D-MANNOPYRANOSE
lig 66
MAN
e
4 11ALPHA-D-MANNOPYRANOSE
lig 67
MAN
e
5 11ALPHA-D-MANNOPYRANOSE
lig 68
NAG
f
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 69
NAG
f
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 70
NAG
g
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 71
FUC
g
2 10ALPHA-L-FUCOPYRANOSE
lig 72
NAG
h
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 73
NAG
h
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 74
BMA
h
3 11BETA-D-MANNOPYRANOSE
lig 75
MAN
h
4 11ALPHA-D-MANNOPYRANOSE
lig 76
MAN
h
5 11ALPHA-D-MANNOPYRANOSE
lig 77
NAG
A
317 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 78
NAG
A
321 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 79
SO4
A
801 5SULFATE ION
lig 80
SO4
A
805 5SULFATE ION
lig 81
SO4
A
813 5SULFATE ION
lig 82
NAG
C
316 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 83
NAG
C
321 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 84
SO4
C
806 5SULFATE ION
lig 85
SO4
C
814 5SULFATE ION
lig 86
SO4
C
818 5SULFATE ION
lig 87
NAG
E
317 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 88
SO4
E
807 5SULFATE ION
lig 89
SO4
E
815 5SULFATE ION
lig 90
SO4
E
820 5SULFATE ION
lig 91
NAG
G
321 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 92
SO4
G
802 5SULFATE ION
lig 93
SO4
G
808 5SULFATE ION
lig 94
SO4
G
816 5SULFATE ION
lig 95
SO4
G
817 5SULFATE ION
lig 96
NAG
I
321 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 97
SO4
I
804 5SULFATE ION
lig 98
SO4
I
809 5SULFATE ION
lig 99
SO4
I
821 5SULFATE ION
lig 100
NAG
K
322 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 101
NAG
K
331 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 102
SO4
K
803 5SULFATE ION
lig 103
SO4
K
810 5SULFATE ION
lig 104
NAG
M
331 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 105
SO4
M
811 5SULFATE ION
lig 106
SO4
M
819 5SULFATE ION
lig 107
NAG
O
321 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 108
SO4
O
812 5SULFATE ION