Analysis of Ligand-Protein Contacts in PDB entry:
2DVC


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 20 ligands in PDB entry 2DVC. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
B
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
B
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
B
5 11ALPHA-D-MANNOPYRANOSE
lig 6
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 11
BMA
D
4 11BETA-D-MANNOPYRANOSE
lig 12
MAN
D
5 11ALPHA-D-MANNOPYRANOSE
lig 13
BMA
D
6 11BETA-D-MANNOPYRANOSE
lig 14
GLC
E
1 11ALPHA-D-GLUCOPYRANOSE
lig 15
FRU
E
2 12BETA-D-FRUCTOFURANOSE
lig 16
FE
A
1002 1FE (III) ION
lig 17
CO3
A
1003 4CARBONATE ION
lig 18
ZN
A
1004 1ZINC ION
lig 19
ZN
A
1005 1ZINC ION
lig 20
SO4
A
1006 5SULFATE ION