Analysis of Ligand-Protein Contacts in PDB entry:
2FD6


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 13 ligands in PDB entry 2FD6. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SO4
A
501 5SULFATE ION
lig 2
ETX
L
401 62-ETHOXYETHANOL
lig 3
EDO
L
405 41,2-ETHANEDIOL
lig 4
ETX
L
407 62-ETHOXYETHANOL
lig 5
ETX
H
403 62-ETHOXYETHANOL
lig 6
EDO
H
404 41,2-ETHANEDIOL
lig 7
PGE
H
406 10TRIETHYLENE GLYCOL
lig 8
NAG
U
452 15N-ACETYL-D-GLUCOSAMINE
lig 9
FUC
U
453 11ALPHA-L-FUCOSE
lig 10
NAG
U
472 15N-ACETYL-D-GLUCOSAMINE
lig 11
NAG
U
473 15N-ACETYL-D-GLUCOSAMINE
lig 12
NDG
U
400 152-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
lig 13
PG4
U
402 13TETRAETHYLENE GLYCOL