Analysis of Ligand-Protein Contacts in PDB entry:
2J25


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 30 ligands in PDB entry 2J25. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 6
MAN
D
4 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
D
5 11ALPHA-D-MANNOPYRANOSE
lig 8
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 11
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
A
1500 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
SO4
A
1501 5SULFATE ION
lig 15
SO4
A
1502 5SULFATE ION
lig 16
SO4
A
1503 5SULFATE ION
lig 17
SO4
A
1504 5SULFATE ION
lig 18
SO4
A
1505 5SULFATE ION
lig 19
SO4
A
1506 5SULFATE ION
lig 20
SO4
A
1507 5SULFATE ION
lig 21
SO4
A
1508 5SULFATE ION
lig 22
SO4
A
1509 5SULFATE ION
lig 23
SO4
B
1508 5SULFATE ION
lig 24
SO4
B
1509 5SULFATE ION
lig 25
SO4
B
1510 5SULFATE ION
lig 26
SO4
B
1511 5SULFATE ION
lig 27
SO4
B
1512 5SULFATE ION
lig 28
SO4
B
1513 5SULFATE ION
lig 29
SO4
B
1514 5SULFATE ION
lig 30
SO4
B
1515 5SULFATE ION