Analysis of Ligand-Protein Contacts in PDB entry:
2NRU


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 14 ligands in PDB entry 2NRU. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
TPO
A
345 11PHOSPHOTHREONINE
lig 2
SEP
A
346 10PHOSPHOSERINE
lig 3
TPO
B
345 11PHOSPHOTHREONINE
lig 4
SEP
B
346 10PHOSPHOSERINE
lig 5
TPO
C
345 11PHOSPHOTHREONINE
lig 6
SEP
C
346 10PHOSPHOSERINE
lig 7
TPO
D
345 11PHOSPHOTHREONINE
lig 8
SEP
D
346 10PHOSPHOSERINE
lig 9
SO4
A
612 5SULFATE ION
lig 10
T12
A
600 32 BENZIMIDAZOL-5-YL PIVALATE
lig 11
SO4
B
611 5SULFATE ION
lig 12
T12
B
601 32 BENZIMIDAZOL-5-YL PIVALATE
lig 13
T12
C
602 32 BENZIMIDAZOL-5-YL PIVALATE
lig 14
T12
D
603 32 BENZIMIDAZOL-5-YL PIVALATE