Analysis of Ligand-Protein Contacts in PDB entry:
2NYM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 14 ligands in PDB entry 2NYM. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
DAL
G
1 5D-ALANINE
lig 2
ACB
G
3 93-METHYL-BETA-D-ASPARTIC ACID
lig 3
1ZN
G
5 23 10-PHENYLDECA-4,6-DIENOIC ACID
lig 4
FGA
G
6 9GAMMA-D-GLUTAMIC ACID
lig 5
DAM
G
7 6N-METHYL-ALPHA-BETA-DEHYDROALANINE
lig 6
DAL
H
1 5D-ALANINE
lig 7
ACB
H
3 93-METHYL-BETA-D-ASPARTIC ACID
lig 8
1ZN
H
5 23 10-PHENYLDECA-4,6-DIENOIC ACID
lig 9
FGA
H
6 9GAMMA-D-GLUTAMIC ACID
lig 10
DAM
H
7 6N-METHYL-ALPHA-BETA-DEHYDROALANINE
lig 11
MN
C
501 1MANGANESE (II) ION
lig 12
MN
C
502 1MANGANESE (II) ION
lig 13
MN
F
501 1MANGANESE (II) ION
lig 14
MN
F
502 1MANGANESE (II) ION