Analysis of Ligand-Protein Contacts in PDB entry:
2NZ4


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 28 ligands in PDB entry 2NZ4. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
A2M
E
0 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 2
GTP
P
12 32GUANOSINE-5'-TRIPHOSPHATE
lig 3
A2M
F
0 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 4
GTP
Q
12 32GUANOSINE-5'-TRIPHOSPHATE
lig 5
A2M
G
0 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 6
GTP
R
12 32GUANOSINE-5'-TRIPHOSPHATE
lig 7
A2M
H
0 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 8
GTP
S
12 32GUANOSINE-5'-TRIPHOSPHATE
lig 9
GLP
P
5001 162-AMINO-2-DEOXY-6-O-PHOSPHONO-ALPHA-D-GLUC
lig 10
MG
P
9005 1MAGNESIUM ION
lig 11
MG
P
9006 1MAGNESIUM ION
lig 12
MG
P
9009 1MAGNESIUM ION
lig 13
MG
P
9010 1MAGNESIUM ION
lig 14
GLP
F
5002 162-AMINO-2-DEOXY-6-O-PHOSPHONO-ALPHA-D-GLUC
lig 15
MG
F
9011 1MAGNESIUM ION
lig 16
MG
Q
9007 1MAGNESIUM ION
lig 17
MG
Q
9008 1MAGNESIUM ION
lig 18
MG
Q
9012 1MAGNESIUM ION
lig 19
GLP
G
5003 162-AMINO-2-DEOXY-6-O-PHOSPHONO-ALPHA-D-GLUC
lig 20
MG
G
9013 1MAGNESIUM ION
lig 21
MG
R
9001 1MAGNESIUM ION
lig 22
MG
R
9002 1MAGNESIUM ION
lig 23
MG
R
9014 1MAGNESIUM ION
lig 24
GLP
H
5004 162-AMINO-2-DEOXY-6-O-PHOSPHONO-ALPHA-D-GLUC
lig 25
MG
H
9015 1MAGNESIUM ION
lig 26
MG
H
9016 1MAGNESIUM ION
lig 27
MG
S
9003 1MAGNESIUM ION
lig 28
MG
S
9004 1MAGNESIUM ION