Analysis of Ligand-Protein Contacts in PDB entry:
2VJB


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 15 ligands in PDB entry 2VJB. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
A
1536 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
A
1537 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
CL
A
1538 1CHLORIDE ION
lig 4
CCD
A
1539 10(4R)-4-HYDROXY-N,N,N-TRIMETHYLPENTAN-1-AMI
lig 5
CCD
A
1540 10(4R)-4-HYDROXY-N,N,N-TRIMETHYLPENTAN-1-AMI
lig 6
PGE
A
1541 10TRIETHYLENE GLYCOL
lig 7
PGE
A
1542 10TRIETHYLENE GLYCOL
lig 8
CL
A
1543 1CHLORIDE ION
lig 9
CL
A
1544 1CHLORIDE ION
lig 10
NAG
B
1536 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
B
1537 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
CL
B
1538 1CHLORIDE ION
lig 13
CCD
B
1539 10(4R)-4-HYDROXY-N,N,N-TRIMETHYLPENTAN-1-AMI
lig 14
CCD
B
1540 10(4R)-4-HYDROXY-N,N,N-TRIMETHYLPENTAN-1-AMI
lig 15
PGE
B
1541 10TRIETHYLENE GLYCOL