Analysis of Ligand-Protein Contacts in PDB entry:
2VT4


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 22 ligands in PDB entry 2VT4. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
P32
A
400 21 INDOLE-2-CARBONITRILE
lig 2
NA
A
401 1SODIUM ION
lig 3
SOG
A
402 20OCTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE
lig 4
SOG
A
403 20OCTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE
lig 5
SOG
A
405 20OCTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE
lig 6
D10
A
406 10DECANE
lig 7
P32
B
400 21 INDOLE-2-CARBONITRILE
lig 8
NA
B
401 1SODIUM ION
lig 9
SOG
B
402 20OCTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE
lig 10
SOG
B
404 10OCTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE
lig 11
SOG
B
405 20OCTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE
lig 12
P32
C
400 21 INDOLE-2-CARBONITRILE
lig 13
NA
C
401 1SODIUM ION
lig 14
SOG
C
402 20OCTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE
lig 15
SOG
C
404 20OCTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE
lig 16
SOG
C
405 20OCTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE
lig 17
D10
C
406 10DECANE
lig 18
P32
D
400 21 INDOLE-2-CARBONITRILE
lig 19
NA
D
401 1SODIUM ION
lig 20
SOG
D
402 20OCTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE
lig 21
SOG
D
403 20OCTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE
lig 22
SOG
D
405 20OCTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE